ID   AJ781783; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ781783;
XX
DT   29-MAR-2005 (Rel. 83, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial mRNA for polyprotein, isolate
DE   Mis1
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Tairo F.;
RT   ;
RL   Submitted (07-JUL-2004) to the INSDC.
RL   Tairo F., Plant Biology and Forest Genetics,, Swedish Univ of Agric
RL   Sciences (SLU), Genetic Centre, Box 7080, SE 750 07, Uppsala, SWEDEN.
XX
RN   [4]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; ab6d64bc1b652f72f295666e6e32190d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Mis1"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Misungwi1"
FT                   /isolation_source="Ipomea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q599Z5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q599Z5"
FT                   /protein_id="CAH03749.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAVRPDTAHLLDKFSECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSILQENDLEVYHQSNERTEF
FT                   KDAGANPPAPKPKDIPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDASKERE
FT                   SIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1814
XX
SQ   Sequence 1814 BP; 560 A; 347 C; 432 G; 475 T; 0 other;
     ggtaacaata gtggtcagcc atccactgtg gttgataata cacttatggt tgtgttagca        60
     gttcactaca cactgctgaa actaggaatc caagaaagcg agtttgataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattgttg gcagtgaggc cagatacagc ccatttactg       180
     gataagttta gcgaatgctt ttctgaatta ggactcaatt acgacttttc atcacgaaca       240
     aataagaagg aagatctatg gtttatgtca cactgtggcg tgaaacgtga tggaatattt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg agtgggatcg ttcacacgag       360
     ccaattcatc gactggaagc aatatgtgcc gctatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttgg accaagcccc ctacaatgaa       480
     ctagcacgaa atgggaaagc accatatata gctgaaactg cactcaaagc actctacact       540
     ggtgttcaac ctaatgcctc tgaattgagt gcgtatacga gagtgctcaa agaaatgtat       600
     gatgacagta tacttcaaga gaatgatttg gaagtatatc atcaatctaa tgagcgcact       660
     gaatttaaag atgcaggagc gaaccctcca gcccctaagc ctaaggacat tcctccacca       720
     cctacaataa ctgagatcac tgatccagag gacccgaagc aggcagcttt gaaagctgca       780
     cgagcaaagc aacccgcagt tattccagaa tcatatggac gagacgcgag caaagaaagg       840
     gagtcaatag tggggacatc atcaaagggt gtgagggaca aagatgtgaa tgttggcacc       900
     gttggtacat ttgtcgtgcc acgtgtcaag atgaatgcaa acaagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccgttc gacccaagaa caattccaag catggtatga gggagtcaaa      1080
     ggggattacg gtgttgacga cacaggaatg gggatcttac tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggacaatgat ggacggtgat      1200
     gagcaagtga catacccaat taaaccatta ttggatcatg cagtgcctac ttttaggcaa      1260
     attatgacgc acttcagtga cgttgctgaa gcctatatag aaatgcgaaa ccgtacaaag      1320
     gcgtacatgc caagatatgg tctacaacgt aatttgactg atatgagcct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaaaga ggcacatttg      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggatggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacca ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agtttatact      1620
     tatgttacct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//