ID   AJ781781; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ781781;
XX
DT   29-MAR-2005 (Rel. 83, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial mRNA for polyprotein, isolate
DE   Bkb1
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Tairo F.;
RT   ;
RL   Submitted (07-JUL-2004) to the INSDC.
RL   Tairo F., Plant Biology and Forest Genetics,, Swedish Univ of Agric
RL   Sciences (SLU), Genetic Centre, Box 7080, SE 750 07, Uppsala, SWEDEN.
XX
RN   [4]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; 24eb977ff45ff6bec60422d67e2f8d6a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Bkb1"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Bukoba1"
FT                   /isolation_source="Ipomea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q599Z7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q599Z7"
FT                   /protein_id="CAH03747.1"
FT                   /translation="GNNSGQPSTVVDYTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAYLLDKFGECFSELGLNYDFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENDLEVYHQSNERTEF
FT                   KDAGANPPAPKPTNNPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDTSKEKE
FT                   SIVGTSSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1814
XX
SQ   Sequence 1814 BP; 566 A; 338 C; 429 G; 481 T; 0 other;
     ggtaataaca gtgggcagcc atctactgtg gttgattata cacttatggt tgtgttagca        60
     gtccactaca cattgctgaa actaggaatc caagaaagcg agtttgataa atgctgtgtc       120
     tttttcgcaa atggtgatga tctattgttg gcaatgaggc cagatacagc ttatttactg       180
     gataagtttg gtgaatgttt ttccgaatta ggactcaatt atgacttttc atcacgaaca       240
     aacaagaagg aagatctatg gtttatgtca cactgtggcg tgaagcgtga tggaatattt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc gactagaagc aatatgtgcc gcgatggtgg aatcatgggg ttatgatgaa       420
     cttcttcatc atattaggaa attctatgca tgggttttgg accaagcccc atacaacgaa       480
     ttagcacgaa atgggaaagc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ctaatgcctc tgaattgagt gcgtatacga gagtgctcaa agaaatgtat       600
     gatgacagta tgctccaaga gaatgatttg gaagtatatc atcaatctaa tgagagaact       660
     gaatttaaag atgcaggtgc gaaccctcca gcccctaagc ctacaaacaa tcctccacca       720
     cccacaataa ctgaaatcac tgatccagag gacccgaagc aggcagcttt gaaagctgca       780
     cgagcaaagc aacccgcagt cattccagaa tcatatggac gagacacgag caaagaaaag       840
     gagtcaatag tggggacatc atcaaagggt gtaagggata aagatgtgaa tgttggcacc       900
     gttggtacat ttgttgtgcc acgtgtcaaa atgaatgcaa acaagaaaag gcaaccaatg       960
     gtcaatggaa gggccattat aaatttccag cacttgtcaa cttatgaacc agagcaattt      1020
     gaggttgcaa acacccggtc gactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgttgacga cacaggaatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggactatgat ggacggtgat      1200
     gagcaagtga catacccaat taaaccatta ttggatcatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcctatatag aaatgcgaaa ccgtacaaag      1320
     gcgtacatgc caagatatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaaaga agcacatttg      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatcc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattgtatct cggttattgc atttgagaag tcgcctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//