ID   AJ781780; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ781780;
XX
DT   29-MAR-2005 (Rel. 83, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial mRNA for polyprotein, isolate
DE   Bag
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Tairo F.;
RT   ;
RL   Submitted (07-JUL-2004) to the INSDC.
RL   Tairo F., Plant Biology and Forest Genetics,, Swedish Univ of Agric
RL   Sciences (SLU), Genetic Centre, Box 7080, SE 750 07, Uppsala, SWEDEN.
XX
RN   [4]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; e839cc74eaaa7e4ae1d2e1b70f1a0c85.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Bag"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Bagamoyo"
FT                   /isolation_source="Ipomea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q599Z8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q599Z8"
FT                   /protein_id="CAH03746.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGIQESEFDKCCVFFANG
FT                   DDLLLAMRPDTAHLLDKFGECFSELGLNYEFSSRTNKKEDLWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   NGKAPYIAETALKALYTGVQPNASELSAYTRVLKEMYDDSMLQENDLEVYHQSNERAEF
FT                   KDAGANPPAPKPKDIPPPPTITEITDPEDPKQAALKAARAKQPAVIPESYGRDTSKERE
FT                   SIVGTSSRGVKDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVANTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNARNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1814
XX
SQ   Sequence 1814 BP; 565 A; 337 C; 436 G; 476 T; 0 other;
     gggaataata gtgggcagcc atccactgtg gttgataata cacttatggt tgtgctagca        60
     gttcactaca cattgctgaa actaggaatc caagaaagcg agtttgataa atgctgtgtc       120
     tttttcgcaa atggtgatga tttattgtta gcaatgaggc cagatacagc ccatttactg       180
     gataagtttg gtgaatgttt ttctgaacta ggactaaatt atgaattttc atcacgaaca       240
     aataagaagg aagatctatg gtttatgtca cactgtggtg tgaaacgtga tggaatattt       300
     attccgaagt tggagcctga aaggattgtt tcaattcttg aatgggatcg ttcacacgag       360
     ccaattcatc ggctggaagc aatatgtgcc gcgatggtgg aatcatgggg ttacgatgaa       420
     cttcttcatc acattaggaa attctatgca tgggttttgg accaagcccc ttacaacgaa       480
     ctagcacgaa acgggaaagc accatacata gctgaaactg cactcaaagc actctatact       540
     ggtgttcaac ctaatgcctc tgaattgagt gcgtatacga gagtgctcaa agaaatgtat       600
     gatgacagca tgctccaaga gaatgatttg gaagtatatc atcaatctaa tgagagagct       660
     gaatttaaag atgcaggagc gaaccctcca gcccctaagc ctaaggacat tcctccacca       720
     cccacaataa ccgaaatcac tgatccagag gacccgaagc aggcagcttt gaaagctgcg       780
     cgagcaaagc aacccgcggt cattccagag tcatatggac gagacacgag caaagaaagg       840
     gagtcaatag tggggacatc atcaaggggt gtgaaggata aagatgtgaa tgttggcacc       900
     gttggtacat ttgttgtgcc acgtgtcaag atgaatgcaa ataagaaaag gcaaccaatg       960
     gtcaatggaa gagccattat aaatttccag cacttgtcaa catatgaacc agagcagttt      1020
     gaggttgcaa acacccggtc aactcaagaa cagttccaag catggtatga aggagttaaa      1080
     ggggattatg gtgttgacga cacagggatg gggatcttat tgaatggact aatggtttgg      1140
     tgcattgaaa atggtacatc cccaaatata aatggtgtgt ggacaatgat ggatggtgat      1200
     gaacaagtga catatccaat taaaccatta ctggaccatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcttacatag agatgcgaaa ccgtacaaaa      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tttacgagct gcattcaact acacctgcac gtgctaagga agcacattta      1440
     cagatgaagg cagccgcact taagaatgcg cgaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacattc tctgcactgt agcttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgaatgcat aacatggtgg gattatatct cggttattgc atttgagaag tcacctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//