ID   AJ781776; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ781776;
XX
DT   29-MAR-2005 (Rel. 83, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 1)
XX
DE   Sweet potato feathery mottle virus partial mRNA for polyprotein, isolate
DE   Aus5
XX
KW   coat protein; CP; NIb protein; nuclear inclusion body protein; polyprotein.
XX
OS   Sweet potato feathery mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1814
RA   Tairo F.;
RT   ;
RL   Submitted (07-JUL-2004) to the INSDC.
RL   Tairo F., Plant Biology and Forest Genetics,, Swedish Univ of Agric
RL   Sciences (SLU), Genetic Centre, Box 7080, SE 750 07, Uppsala, SWEDEN.
XX
RN   [4]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; 12335f3ba3ac3cd2bf55c740f51a859c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato feathery mottle virus"
FT                   /isolate="Aus5"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Western"
FT                   /isolation_source="Ipomea batatas"
FT                   /db_xref="taxon:12844"
FT   CDS             <1..1593
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q59A02"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q59A02"
FT                   /protein_id="CAH03744.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAVHYTLLKLGVQESEFDECCVFFANG
FT                   DDLLLAMRPDTAHLLDKFSECFSELGLNYDFSSRTSNKEELWFMSHCGVKRDGIFIPKL
FT                   EPERIVSILEWDRSHEPIHRLEAICAAMVESWGYDELLHHIRKFYAWVLDQAPYNELAR
FT                   SGKAPYIAETALKALYTGVQPSASELSAYAKVLNEMYDDSVLQENELEVYHQSSERTEF
FT                   KDAGANPPAPKPKDIPPPPTITEVTDPEDPKQAALRAARAKQPATIPESYGRDTSKEKE
FT                   SIVGAPSKGVRDKDVNVGTVGTFVVPRVKMNANKKRQPMVNGRAIINFQHLSTYEPEQF
FT                   EVASTRSTQEQFQAWYEGVKGDYGVDDTGMGILLNGLMVWCIENGTSPNINGVWTMMDG
FT                   DEQVTYPIKPLLDHAVPTFRQIMTHFSDVAEAYIEMRNRTKAYMPRYGLQRNLTDMSLA
FT                   RYAFDFYELHSTTPARAKEAHLQMKAAALKNAKNRLFGLDGNVSTQEEDTERHTTTDVT
FT                   RNIHNLLGMRGVQ"
FT   mat_peptide     <1..645
FT                   /product="nuclear inclusion body protein"
FT                   /note="NIb"
FT   mat_peptide     646..1590
FT                   /product="coat protein"
FT                   /note="CP"
FT   3'UTR           1594..1814
XX
SQ   Sequence 1814 BP; 561 A; 342 C; 443 G; 468 T; 0 other;
     gggaacaata gtgggcagcc atccactgtg gttgataaca cacttatggt tgtgttagca        60
     gtacactaca cactgctgaa actaggtgtt caggagagcg agtttgatga atgctgcgtc       120
     tttttcgcga atggagatga tctattactg gcaatgaggc cagacacagc tcatttactg       180
     gataagttta gtgagtgctt ttcagagtta ggactcaatt atgatttttc atcgcgaacc       240
     agtaataaag aagagctatg gtttatgtca cactgcggag tgaaacgtga tggaatattc       300
     ataccgaagc tggagcctga gagaattgtc tccattcttg aatgggatcg ctcacacgaa       360
     ccgatccatc gattggaagc aatatgtgct gcgatggtag aatcatgggg ttatgatgaa       420
     cttcttcatc atatcagaaa attctatgca tgggtattgg accaagcccc atacaatgaa       480
     ttagcacgaa gtgggaaggc accatacata gctgaaactg cacttaaagc actctatact       540
     ggagtccaac ctagtgcttc tgaattaagt gcgtatgcaa aagtgcttaa cgaaatgtat       600
     gatgatagtg tacttcagga gaatgagtta gaagtatacc atcaatctag tgaacgtact       660
     gaattcaaag atgcaggagc gaaccctcca gcccctaagc ctaaggatat ccctccacca       720
     cccacaataa ctgaggttac tgatccagaa gacccaaagc aggcagcttt gagagctgca       780
     cgagctaagc aacccgcaac cattccagaa tcatatggac gagacactag caaggagaag       840
     gaatcaatag tgggggcacc atcaaagggt gtgagggaca aagatgtaaa cgttggtaca       900
     gttggtacgt ttgtcgtgcc acgtgttaag atgaatgcaa acaagaaaag gcaaccaatg       960
     gtaaatggaa gggccattat aaatttccaa cacttgtcaa catatgagcc agaacagttt      1020
     gaggttgcaa gcacccggtc gactcaagaa cagtttcaag catggtatga aggagtgaaa      1080
     ggggactatg gtgttgacga tacaggaatg gggatcttat tgaatggatt aatggtttgg      1140
     tgcattgaaa atggcacatc cccaaatata aatggtgtgt ggacaatgat ggatggtgat      1200
     gagcaagtga catatccaat taaaccattg ttggaccatg cagtgcctac ttttaggcag      1260
     attatgacgc acttcagtga cgttgctgaa gcttacatag agatgcgaaa ccgtacaaag      1320
     gcatacatgc caaggtatgg tctacaacgt aatttgactg atatgagtct tgcgcgatat      1380
     gcatttgatt tctacgagct gcattcaacc acccctgcac gtgcaaaaga agcacattta      1440
     cagatgaagg cagccgcact taagaatgcg aaaaatcggt tgtttggttt ggacggaaac      1500
     gtctccacgc aagaagaaga tacggagagg cacacgacaa ctgatgttac tagaaatata      1560
     cataacctct taggaatgag gggtgtgcaa taggacatct tctgcactgt agtttatact      1620
     tatgttatct ttagtatgcc tttaatttaa attcgtgtct ttcagtcccg aaggagatgg      1680
     ttgagtgcat aacatggtgg gattatatct cggttattgc atttgagaag tcgcctttct      1740
     attacgtatc ataagggact cttaaaagtg aggagtacct cgtaagaaaa gcctttttgg      1800
     ttcgtgatcg agcc                                                        1814
//