ID   AJ781318; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
XX
AC   AJ781318;
XX
DT   06-JUL-2004 (Rel. 80, Created)
DT   28-SEP-2005 (Rel. 85, Last updated, Version 3)
XX
DE   Lily symptomless virus cp gene for coat protein, genomic RNA, isolate
DE   LSV-Lt
XX
KW   coat protein; cp gene.
XX
OS   Lily symptomless virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-879
RA   Singh A.K.;
RT   ;
RL   Submitted (01-JUL-2004) to the INSDC.
RL   Singh A.K., Floriculture Division, Institute of Himalayan Bioresource
RL   Technology, P.O. Box 6, Palampur, Himachal Pradesh - 176061, INDIA.
XX
RN   [3]
RX   DOI; 10.1111/j.1365-3059.2005.01254.x.
RX   AGRICOLA; IND43750484.
RA   Singh A.K., Hallan V., Ram R., Zaidi A.A.;
RT   "Variability in the coat protein of Lily symptomless virus isolates
RT   infecting various lily species";
RL   Plant Pathol. 54(5):621-624(2005).
XX
DR   MD5; 94c0022070d12ad3ee0cd3d411afeb48.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..879
FT                   /organism="Lily symptomless virus"
FT                   /host="Lilium tigrinum"
FT                   /isolate="LSV-Lt"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Himachal Pradesh, Palampur"
FT                   /db_xref="taxon:12173"
FT   CDS             7..879
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q6EV81"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q6EV81"
FT                   /protein_id="CAH03663.1"
FT                   /translation="MQSRPEQESGSASETPARGRPTPSDAPRDEPTNYNNNAESLLEQR
FT                   LTRLIEKLNAEKHNSNLRNVAFEIGRPSLEPTSAMRRNPANPYGRFSIDELFKMKVGVV
FT                   SNNMATTEQMAKIASDIARLGVPTEHVASVILQMVIMCACVSSSAFLDPEGSIEFENGA
FT                   VPVDSIAAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPQLMASYGLPYNTRFAAFDTSLR
FT                   GLTKRLSNLSRGSSGDPLQLRSLPTTRTSNLALDRSNRNERLGSLETEYTGGVQGAEIV
FT                   RNHRYANNG"
XX
SQ   Sequence 879 BP; 247 A; 237 C; 227 G; 168 T; 0 other;
     ggatccatgc aatcaagacc agaacaagaa tccggctctg caagcgagac ccctgcacgt        60
     ggcaggccca cacctagtga tgcaccgaga gatgagccca ccaattacaa taataacgct       120
     gagtcactgt tagagcaacg actaacccgg ctgatcgaga agctcaatgc tgaaaagcac       180
     aattccaatc tgcgaaatgt ggctttcgag atcgggaggc cctcactgga acccacgagt       240
     gccatgcgaa ggaaccctgc gaacccctac gggagattct caattgacga actcttcaag       300
     atgaaggttg gcgtcgtatc taacaacatg gcaaccactg aacaaatggc caagatagcg       360
     tcagacatcg caaggcttgg ggtaccaacg gagcacgtcg catcagtaat attgcaaatg       420
     gtcatcatgt gtgcttgcgt gagcagttcg gcgttccttg accctgaggg cagcattgag       480
     tttgagaatg gagcggtacc cgtcgactcc atcgctgcga tcatgaagaa gcacgccgga       540
     ctgcgcaaag tctgccggct ctatgcccct atcgtgtgga acagcatgct tgtgcgaaat       600
     caaccccagc tgatggcaag ctatgggctt ccatacaaca cgcggttcgc agcttttgac       660
     acttcactac gtggactaac caaaaggcta tccaacctgt cgaggggatc atcaggcgac       720
     ccacttcagc tgaggtcatt gcccacaacg cgcacaagca atttagccct ggataggtca       780
     aaccgcaatg agcgtctggg gagcctggaa accgaataca ccggtggggt acaaggagct       840
     gaaatcgtcc gaaaccatcg atacgcaaat aatggatga                              879
//