ID AJ781302; SV 1; circular; genomic DNA; STD; VRL; 2738 BP. XX AC AJ781302; XX DT 15-JUL-2004 (Rel. 80, Created) DT 01-DEC-2004 (Rel. 82, Last updated, Version 4) XX DE Tomato yellow leaf curl China virus-[Y43] complete genome, isolate Y43 XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; KW complete genome; rep protein. XX OS Tomato yellow leaf curl China virus-[Y43] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2738 RA Zhou X.; RT ; RL Submitted (04-JUL-2004) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, 310029, Zhejiang, RL CHINA. XX RN [2] RX DOI; 10.1128/JVI.78.24.13966-13974.2004. RX PUBMED; 15564504. RA Cie X., Tao X., Xie Y., Fauquet C.M., Zhou X.; RT "A DNA beta associated with Tomato yellow leaf curl China virus is r RT equired for symptom induction in hosts"; RL J. Virol. 78(24):13966-13974(2004). XX DR MD5; 4ef6c976b9b4d79ae08e131c9aff3751. DR EuropePMC; PMC533896; 15564504. XX FH Key Location/Qualifiers FH FT source 1..2738 FT /organism="Tomato yellow leaf curl China virus-[Y43]" FT /mol_type="genomic DNA" FT /db_xref="taxon:284541" FT CDS 129..476 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q6EV87" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6EV87" FT /protein_id="CAH03764.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYGEASRRYSHFHSRLEGASPAELRQPIHGSCCCPHCPRHQKANVGKQAHVS FT EAHDVPDVQKP" FT CDS 289..1059 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q6EV86" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6EV86" FT /protein_id="CAH03765.1" FT /translation="MAKRPADIVISTPASKVRRRLNFDSPYTGRAAVPTVRVTRRQMWA FT NRPMYRKPMMYRMYRSPDVPRGCEGPCKVQSYEARHDVSHTGKVICVSDVTRGNGITHR FT VGKRFCVKSIYVIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP FT STATVKNDLRDRFQVRRKFYATVTGGQYACKEQALVKKFLRVNTHVVYNHQEQAKYENH FT TENALLLYMVSTHASNPVYATLKVRIYFYDSQMN" FT CDS complement(1056..1460) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q6EV85" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6EV85" FT /protein_id="CAH03766.1" FT /translation="MDSRTGELLTAAQAENGVYIWTVKNPLYFKITKHYERPFLRNHDI FT ITLQVQFNYNLRKALGIHKCFLTCKIWTRLRPQTLRFLRVFKFQCIKYLDRLGVISINN FT VIRAISHVLYNVLEGTIDVLEDHDIKLNIY" FT CDS complement(1201..1605) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q6EV84" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6EV84" FT /protein_id="CAH03767.1" FT /translation="MQSSSPSNAHSTQVPIKVQHRIAKRTTRRRRVDLPCGCSYFIALG FT CHDNGFTHRGTTHCSSSREWRLYLDGQKSPLFQDNKTLRKTIPEEPRHNHITSPIQLQP FT EESVGDTQMFSNLQNLDSFTSSDLAFLKSI" FT CDS complement(1508..2593) FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:Q6EV83" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6EV83" FT /protein_id="CAH03768.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEETLSQIKALETPVNKLFIR FT ICRELHVDGTPHLHVLIQFEGKFQCKNQRFFDLISPHRSAHFHPNIQGAKSSTDVKTYM FT EKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNNNLDRIFTPPLEEYISPFSSSSFDQVPEELDEWAIENVVSAAARPLRPVSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALKNWAVKNAIFVTLQRPL FT YSSSYQGTTPNRQEDNQTTES" FT CDS complement(2143..2436) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6EV82" FT /protein_id="CAH03769.1" FT /translation="MGLLTCMSSSSSKESSSVKTKDSSISYPHIGQHISIRTFRELKAQ FT QMSKHTWRKTETCLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2738 BP; 734 A; 544 C; 607 G; 853 T; 0 other; accggatggc cgcgcgattt ttttaaagtg gtccccgcag acaagtgtat ccaatcctat 60 ccgctcctca aagcttaatt attaaatggt cccctataaa acttagcccc caagtattga 120 cgttaaacat gtgggatcct ctactcaacg agttccctga aaccgtacat gggtttaggt 180 gcatgttagc aattaagtat ttgcagttag tcgaaaatac ttattccccc gatacattag 240 gttacgattt aatacgtgat ttaattttag ttatacgtgc tagagattat ggcgaagcgt 300 cccgccgata tagtcatttc cactcccgcc tcgaaggtgc gtcgccggct gaacttcgac 360 agcccataca cgggtcgtgc tgctgtcccc actgtccgcg tcaccagaag gcaaatgtgg 420 gcaaacaggc ccatgtatcg gaagcccatg atgtaccgga tgtacagaag ccctgatgtt 480 cccaggggtt gtgaaggtcc atgtaaagtt cagtcctatg aggcccgtca tgatgtttct 540 catactggta aggttatttg tgtaagtgat gttacacgtg gtaatggaat tactcatcgt 600 gttggtaaga ggttttgtgt taaatctatt tacgtcattg ggaagatatg gatggacgag 660 aatataaaag tgaagaacca tacaaatacg gtgatgtttt ttctggtaag agatcgccgt 720 ccgagtggaa cacctatgga tttccagcaa gtctttaatt gttatgacaa tgaacccagt 780 actgctactg taaaaaacga tttaagggat cgttttcaag ttcgtcgtaa gttctatgcc 840 acggttacag gtggacagta cgcttgtaag gagcaggcgt tggtcaagaa atttctacgg 900 gttaacacac atgtcgttta caatcaccaa gaacaggcga agtatgagaa tcatacagag 960 aatgctttgt tgttgtatat ggtttctact catgcaagta atcctgtata tgcgactttg 1020 aaagtccgca tttatttcta tgactctcaa atgaattaat aaatattgag ttttatatca 1080 tgatcttcga gtacatcaat tgtgccttct agtacattat acaatacatg agatattgct 1140 cttattacat tgttgatgct aatcacgcct aacctatcta aatatttaat acattgaaat 1200 ttaaatactc ttaagaaacg caaggtctga ggacgtaaac gagtccagat tttgcaggtt 1260 agaaaacatt tgtgtatccc caacgctttc ctcaggttgt agttgaattg gacttgtaat 1320 gtgattatgt cgtggttcct caggaatggt ctttcgtagt gttttgttat cttgaaataa 1380 aggggatttt tgaccgtcca gatataaacg ccattctctg cttgagctgc agtgagtagt 1440 tccccggtgc gtgaatccat tatcgtgaca gcctagagcg atgaagtatg aacagccaca 1500 cggtagatca actctccgtc gtctggttgt cctcttggcg attcggtgtt gtaccttgat 1560 aggaacttga gtagagtggg cgttggaggg tgacgaagat tgcatttttt accgcccagt 1620 ttttaagtgc ggagttcttt tcctcttcca gatactcttt atagctggaa ttgggtcctg 1680 gattgcagag gaagatagtg ggtataccac ctttaatttg aactggcttg ccgtatttgg 1740 tgttgctttg ccagtccctt tgggccccca tgaattcttt aaagtgcttt aagtagtgcg 1800 gatcgacgtc atcaatgacg ttgaaccacg catcattatt gtacaccttt ggactcaaat 1860 ccagatgacc acacaaataa ttatgtggtc ctaatgacct ggcccacatc gtcttccccg 1920 tcctgctatc accctctatg actatactta ccggtctcaa aggccgcgca gcggcactca 1980 caacattttc tattgcccat tcatcaagtt cttctggaac ttgatcaaaa gaagaagaag 2040 aaaaaggaga aatatattcc tctaatggag gagtaaaaat cctatctaaa ttattattta 2100 aattatgaaa ctgtaaaaca aaatccttag gagccttctc cctcagtata ttgagggccg 2160 aagctttgga ccctgaattg attgcctcgg catatgcgtc gttggcagat tggcaacctc 2220 ctctagctga tcgtccatcg atttggaaaa ctccatgatc aagcacgtct ccgtctttct 2280 ccatgtatgt tttgacatct gttgagcttt tagctccctg aatgttcgga tggaaatgtg 2340 ctgacctatg tggggatatg agatcgaaga atctttggtt tttacactgg aactttcctt 2400 cgaactggat gaggacatgc aggtgaggag tcccatctac gtgcaattct ctacagattc 2460 ggatgaatag tttattaact ggggtttcta gggctttaat ttgggaaagt gtctcttctt 2520 tggtgagaga acagtgtggg tatgtaagga aataattttt ggcatttatt ctgaatttat 2580 ttggaggagc cattgactgg tcaattggtg tctctcaaac ttggctatgc aatcggtgtc 2640 tggggtctta tttatatgtg gacaccaaat ggcataattg taaattctta atggaaattc 2700 aaaattcaaa atgcaaaagc ggccatccgt ataatatt 2738 //