ID   AJ780923; SV 2; linear; genomic RNA; STD; VRL; 882 BP.
XX
AC   AJ780923;
XX
DT   29-JUN-2004 (Rel. 80, Created)
DT   30-MAR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Lily symptomless virus cp gene for coat protein, genomic RNA, isolate
DE   LSV-SL
XX
KW   coat protein; cp gene.
XX
OS   Lily symptomless virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RC   revised by [3]
RA   Singh A.K.;
RT   ;
RL   Submitted (17-JUN-2004) to the INSDC.
RL   Singh A.K., Floriculture Division, Inst Himalayan Bioresource Technology,
RL   P.O.Box No. 6, Palampur, Himachal Pradesh - 176 061, INDIA.
XX
RN   [2]
RX   DOI; 10.1111/j.1365-3059.2005.01122.x.
RX   AGRICOLA; IND43697940.
RA   Singh A.K., Hallan V., Verma N., Zaidi A.A.;
RT   "Natural occurrence of Lily symptomless virus on spider lily";
RL   Plant Pathol. 54(2):255-255(2005).
XX
RN   [3]
RP   1-882
RA   Singh A.K.;
RT   ;
RL   Submitted (01-JUL-2004) to the INSDC.
RL   Singh A.K., Floriculture Division, Inst Himalayan Bioresource Technology,
RL   P.O.Box No. 6, Palampur, Himachal Pradesh - 176 061, INDIA.
XX
DR   MD5; 373a7591c11194067f3026da5499af4d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..882
FT                   /organism="Lily symptomless virus"
FT                   /host="Hymenocallis littoralis (spider lily)"
FT                   /isolate="LSV-SL"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Himachal Pradesh, Palampur"
FT                   /db_xref="taxon:12173"
FT   CDS             7..882
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q6H8I4"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q6H8I4"
FT                   /protein_id="CAG47103.2"
FT                   /translation="MQSRPEQESGSASETPARGRPTPSDAPRDEPTNYNNNAESLLEQR
FT                   LTRLIEKLNAEKHNSNLRNVAFEIGRPSLEPTSAMRRNPANPYGRFSIDELFKMKVGVV
FT                   SNNMATTEQMAKIASDIAGLGVPTEHVASVILQMVIMCACVSSSAFLDPEGSIEFENGA
FT                   VPVDSIAAIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPADWQAMGFQYNTRLAAFDTFE
FT                   NVTNQAAIQPVEGIIRRPTSAEVIAHNAHKQLALDRSNRNERLGSLETEYTGGVQGADF
FT                   VRNGKYANNG"
XX
SQ   Sequence 882 BP; 247 A; 231 C; 232 G; 172 T; 0 other;
     ggatccatgc aatcaagacc agaacaagaa tccggctctg caagcgagac ccctgcacgt        60
     ggcaggccca cacccagtga tgcaccaaga gacgagccca ccaattacaa taacaacgct       120
     gagtcactgt tagagcaacg actaacccgg ctgattgaga agctcaatgc tgaaaagcac       180
     aattccaatc tgcgaaatgt ggctttcgag atcgggaggc cctcgctgga acccacgagt       240
     gccatgcgaa ggaatcctgc gaacccctac gggagattct caattgacga actcttcaag       300
     atgaaggttg gcgtcgtatc taacaacatg gcaaccactg aacaaatggc caagatagcg       360
     tcagacatcg cagggcttgg agtaccaacg gagcacgtcg catcagtaat attgcaaatg       420
     gtcatcatgt gtgcttgcgt gagcagttcg gcgttccttg accctgaggg cagcattgag       480
     tttgagaatg gagcggtgcc cgtcgactcc atcgctgcga tcatgaagaa gcacgctgga       540
     ctgcggaaag tctgccggct ctatgcccct atcgtgtgga acagcatgct tgtgcgaaat       600
     caaccaccag ctgattggca agctatgggc ttccaataca atacgcggtt agcagctttt       660
     gacaccttcg aaaacgtgac taaccaggcg gctatccaac ctgtcgaggg gatcatcagg       720
     cgacccactt ctgctgaggt cattgcccac aacgcgcaca agcaattagc cctggatagg       780
     tcaaaccgca atgagcgtct ggggagtctg gaaaccgaat acaccggtgg ggtacaagga       840
     gctgatttcg tccgaaatgg aaaatacgca aataatggat ga                          882
//