ID   AJ746196; SV 1; linear; genomic RNA; STD; VRL; 1539 BP.
XX
AC   AJ746196;
XX
DT   09-JUN-2005 (Rel. 84, Created)
DT   26-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Lettuce necrotic yellows virus N gene for nucleocapsid protein, genomic
DE   RNA, isolate 7
XX
KW   N gene; nucleocapsid protein.
XX
OS   Lettuce necrotic yellows virus
OC   Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes;
OC   Mononegavirales; Rhabdoviridae; Cytorhabdovirus.
XX
RN   [1]
RP   1-1539
RA   Dietzgen R.G.;
RT   ;
RL   Submitted (08-JUN-2004) to the INSDC.
RL   Dietzgen R.G., QABC, Qld Bioscience Precinct, Dept of Primary Industries
RL   and Fisheries, The University of Queensland, 306 Carmody Rd, St Lucia Qld
RL   4072, AUSTRALIA.
XX
RN   [2]
RX   DOI; 10.1007/s00705-005-0528-7.
RX   PUBMED; 15824884.
RA   Callaghan B.P., Dietzgen R.G.;
RT   "Nucleocapsid gene variability reveals two subgroups of Lettuce necrotic
RT   yellows virus";
RL   Arch. Virol. 150(8):1661-1667(2005).
XX
RN   [3]
RA   Callaghan B.P.;
RT   "Molecular characterisation of lettuce necrotic yellows virus";
RL   Unpublished.
XX
DR   MD5; 62870e74096adb911a556ebc5e99ecd0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1539
FT                   /organism="Lettuce necrotic yellows virus"
FT                   /host="Picris echioides"
FT                   /isolate="7"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:South Australia"
FT                   /isolation_source="field sample"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:32612"
FT   CDS             79..1458
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q4W385"
FT                   /db_xref="InterPro:IPR004902"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W385"
FT                   /protein_id="CAG34088.1"
FT                   /translation="MTTSAEKLAKLEQLRKERSAVIQKPTVQASSDQVATEKPRVRNTA
FT                   YDSLAGVTIGKRASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNSVNTVTV
FT                   DYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKRTLDAT
FT                   RKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLLKLYA
FT                   KSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWTLWV
FT                   AVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDCPA
FT                   TRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVSK
FT                   KVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASWATKAAA
FT                   Q"
XX
SQ   Sequence 1539 BP; 469 A; 315 C; 383 G; 372 T; 0 other;
     gaaaccacat taagtcatat ccttctaact ctataccctg tgttatttca gtcaaagtct        60
     tttgatcctt atccaaatat gactacgtcc gctgagaagt tagcaaagtt ggagcagtta       120
     aggaaagaaa ggtccgctgt cattcaaaaa ccgacagttc aggcgagctc ggatcaagtt       180
     gcgacagaga agcctagggt caggaacaca gcgtatgata gtctagcagg agtgacgata       240
     ggaaagagag catcaaggaa atggtccgat gcagatatca aaagtattcc tatatatgat       300
     gtccatcagg tcccggctgc tcaagtcatt gctttaggga aagatctgct gacacagatt       360
     cagaacaact ctgtcaacac tgtcacagta gactactgtt tagtgttggc agtatctata       420
     cctaagccag caatgacatc ttttgaacac ctcctaacac ctccttcttc agatcaaggt       480
     actaggctcg acttcacaca accgcaggcg ggagtatcta acagatcagg gttgacggct       540
     atagagaaga ggactctgga cgcaacccgg aagaatttgt tgactgagac tgatgaggaa       600
     aagagggcta ggtacgaagc aataattaaa aagatggaag accaagaggc tggattgggc       660
     acatcaagga ctactgtagt aacctcggaa accgaggcag cggcatacgg gtttttggcg       720
     gcaacattgc taaaactata cgcgaaatca actgagtctt atatagccgg acttgcccag       780
     ataaggaaca gatttgcggc atggtatgat tgcccaaaag cagtgttgga tgctttccag       840
     ccgacagagg cagctttggt gtcactgaga gcagcgtttg cccgcagacc cgaagtgtta       900
     tcgacatgga cactgtgggt tgctgtgaac gagaatagga cccctggact attggtcact       960
     caacaagggt tgttgaatta cctagcttgc caacaattcg cttatcctgg tatgcacgca      1020
     tacactctgt tgatagaaat acatgagcat acaggaatga agttcagcga tttgttagtg      1080
     gagatggatt gtccggccac tcgcgcaggt gtgagggaag ctttggagtt gattagggat      1140
     tatgagataa ccaaggatca cccgaaacga acaacctatt ttcgatatgc taggaattgg      1200
     gatcctaagt acttcggggc actacaatcg acagaatgca agaccctagt gtatgttgcc      1260
     gcctccgtta gtaagaaggt ctctgcccaa ggtgcaaatg gggatccaat ggagatattt      1320
     gcgattaaaa acctggatgc aacgataaag gccaggttgg atcctgttgc agagaatatg      1380
     gcagggaaaa tattggatca gatgctcatg gatgagatgt ctggggcatc ttgggcgaca      1440
     aaagcagcag ctcaataaac agttatcatc tatctataaa gctacagata cgcgcttata      1500
     tataccctca actctatata tatagttgat ttaagaaaa                             1539
//