ID   AJ746195; SV 1; linear; genomic RNA; STD; VRL; 1533 BP.
XX
AC   AJ746195;
XX
DT   09-JUN-2005 (Rel. 84, Created)
DT   26-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Lettuce necrotic yellows virus N gene for nucleocapsid protein, genomic
DE   RNA, isolate 6
XX
KW   N gene; nucleocapsid protein.
XX
OS   Lettuce necrotic yellows virus
OC   Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes;
OC   Mononegavirales; Rhabdoviridae; Cytorhabdovirus.
XX
RN   [1]
RP   1-1533
RA   Dietzgen R.G.;
RT   ;
RL   Submitted (08-JUN-2004) to the INSDC.
RL   Dietzgen R.G., QABC, Qld Bioscience Precinct, Dept of Primary Industries
RL   and Fisheries, The University of Queensland, 306 Carmody Rd, St Lucia Qld
RL   4072, AUSTRALIA.
XX
RN   [2]
RX   DOI; 10.1007/s00705-005-0528-7.
RX   PUBMED; 15824884.
RA   Callaghan B.P., Dietzgen R.G.;
RT   "Nucleocapsid gene variability reveals two subgroups of Lettuce necrotic
RT   yellows virus";
RL   Arch. Virol. 150(8):1661-1667(2005).
XX
RN   [3]
RA   Callaghan B.P.;
RT   "Molecular characterisation of lettuce necrotic yellows virus";
RL   Unpublished.
XX
DR   MD5; f97426ec28dc3234ab75344e0192a91d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1533
FT                   /organism="Lettuce necrotic yellows virus"
FT                   /host="lettuce"
FT                   /isolate="6"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:South Australia"
FT                   /isolation_source="field sample"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:32612"
FT   CDS             79..1458
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q4W386"
FT                   /db_xref="InterPro:IPR004902"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W386"
FT                   /protein_id="CAG34087.1"
FT                   /translation="MTTSAEKLAKLEQLRKERAAVIQKPTTQVSSDPVVTEKPRVRNTA
FT                   YDSLAGVTIGKRASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNSVNTVTV
FT                   DYCLVLAVSIPKPAMTSFEHLLTPPSPEQGTRLDFTQPQAGVSNRSGLTAIEKMTLNAT
FT                   RKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSKATVVTSETEAAAYGFLAASLLKLYA
FT                   KSTESYVAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWTLWV
FT                   AVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDCPA
FT                   TRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVSK
FT                   KVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASWATKAST
FT                   Q"
XX
SQ   Sequence 1533 BP; 470 A; 313 C; 375 G; 375 T; 0 other;
     gaaaccacat taagtcatac ccttctaatt gtataccccg tgttatttca gtcacagtcc        60
     actaatcctt atccaaagat gactacatcc gctgaaaagt tggctaagtt ggaacaattg       120
     aggaaagaga gggctgctgt aatacaaaaa cctacaactc aggttagctc tgacccggtg       180
     gtgacagaga aacccagagt caggaacacg gcgtacgaca gtctagcagg agtgacaata       240
     gggaagagag catcacggaa atggtcagat gcagatatca agagtatccc gatatatgat       300
     gtccatcagg ttccggctgc tcaggttatt gcattaggaa aggatctttt gacacagatt       360
     cagaacaact ctgtgaacac ggtcactgta gactactgtc tagtccttgc tgtgtcaatc       420
     cctaagcctg caatgacatc atttgagcat ctgctcacac ccccatctcc ggaacaaggt       480
     acaagacttg atttcacaca accgcaggct ggagtctcga atagatcagg gttgacagca       540
     attgagaaaa tgactctgaa tgcgactcgg aaaaatctgt tgactgagac ggatgaagag       600
     aagagagcca gatatgaagc gataatcaag aagatggaag accaagaggc agggctagga       660
     acatcgaagg ccactgtggt aacatctgaa actgaggcgg cggcttatgg attcttagct       720
     gcctcattgt taaaactgta tgcgaaatca actgagtcct atgtagccgg gctggcacag       780
     ataagaaatc ggtttgccgc gtggtatgat tgtccgaaag ctgtgttaga tgctttccaa       840
     cccactgaag cagccttagt gtcattgaga gcagcatttg cacgcagacc tgaagtctta       900
     tccacatgga ctttatgggt tgcagtgaat gagaacagaa cccccggatt gctagtgacg       960
     cagcaagggt tactgaatta ccttgcttgc caacaatttg cctaccctgg tatgcatgca      1020
     tacactctct tgatagagat acacgaacac acgggtatga agtttagtga tttgctagtg      1080
     gagatggatt gtccggccac tagagcaggt gtacgggagg ctttagagtt gataagagat      1140
     tatgagataa ccaaagatca tcctaagaga accacttact tcagatatgc tcggaattgg      1200
     gacccaaaat attttggggc actacaatct acagaatgca agactctcgt atacgttgct      1260
     gcgtctgtca gtaagaaggt ctctgctcag ggagctaacg gtgaccctat ggaaatattt      1320
     gccatcaaaa atctagatgc aactatcaag gctaggttag accccgtggc tgagaatatg      1380
     gcgggtaaga tattggatca gatgcttatg gatgagatgt ctggagcatc gtgggcaacg      1440
     aaggcatcaa cacaatgaag agttgatgtc attaaatatt taagcatatt tgatactatg      1500
     attatatcac tggttaccga agatttaaga aaa                                   1533
//