ID   AJ746194; SV 1; linear; genomic RNA; STD; VRL; 1539 BP.
XX
AC   AJ746194;
XX
DT   09-JUN-2005 (Rel. 84, Created)
DT   26-JUL-2005 (Rel. 84, Last updated, Version 2)
XX
DE   Lettuce necrotic yellows virus N gene for nucleocapsid protein, genomic
DE   RNA, isolate 5
XX
KW   N gene; nucleocapsid protein.
XX
OS   Lettuce necrotic yellows virus
OC   Viruses; Riboviria; Negarnaviricota; Haploviricotina; Monjiviricetes;
OC   Mononegavirales; Rhabdoviridae; Cytorhabdovirus.
XX
RN   [1]
RP   1-1539
RA   Dietzgen R.G.;
RT   ;
RL   Submitted (08-JUN-2004) to the INSDC.
RL   Dietzgen R.G., QABC, Qld Bioscience Precinct, Dept of Primary Industries
RL   and Fisheries, The University of Queensland, 306 Carmody Rd, St Lucia Qld
RL   4072, AUSTRALIA.
XX
RN   [2]
RX   DOI; 10.1007/s00705-005-0528-7.
RX   PUBMED; 15824884.
RA   Callaghan B.P., Dietzgen R.G.;
RT   "Nucleocapsid gene variability reveals two subgroups of Lettuce necrotic
RT   yellows virus";
RL   Arch. Virol. 150(8):1661-1667(2005).
XX
RN   [3]
RA   Callaghan B.P.;
RT   "Molecular characterisation of lettuce necrotic yellows virus";
RL   Unpublished.
XX
DR   MD5; d0c13b55c75e168703fe8f02fe0dd1bf.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1539
FT                   /organism="Lettuce necrotic yellows virus"
FT                   /host="lettuce"
FT                   /isolate="5"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia:Western Australia"
FT                   /isolation_source="field sample"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:32612"
FT   CDS             79..1458
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q4W387"
FT                   /db_xref="InterPro:IPR004902"
FT                   /db_xref="UniProtKB/TrEMBL:Q4W387"
FT                   /protein_id="CAG34086.1"
FT                   /translation="MTTSAEKLAKLEQLRKERSAVIQKPTVQASSEQVKTEKPRVRNTA
FT                   YDSLAGVTIGKRASRKWSDADIKSIPIYDVHQVPAAQVIALGKDLLTQIQNNSVNTVTV
FT                   DYCLVLAVSIPKPAMTSFEHLLTPPSSDQGTRLDFTQPQAGVSNRSGLTAIEKRTLDAT
FT                   RKNLLTETDEEKRARYEAIIKKMEDQEAGLGTSRTTVVTSETEAAAYGFLAATLLKLYA
FT                   KSTESYIAGLAQIRNRFAAWYDCPKAVLDAFQPTEAALVSLRAAFARRPEVLSTWTLWV
FT                   AVNENRTPGLLVTQQGLLNYLACQQFAYPGMHAYTLLIEIHEHTGMKFSDLLVEMDCPA
FT                   TRAGVREALELIRDYEITKDHPKRTTYFRYARNWDPKYFGALQSTECKTLVYVAASVSK
FT                   KVSAQGANGDPMEIFAIKNLDATIKARLDPVAENMAGKILDQMLMDEMSGASWATKAAA
FT                   Q"
XX
SQ   Sequence 1539 BP; 478 A; 313 C; 377 G; 371 T; 0 other;
     gaaaccacat taagtcatat ccttctaact ctataccctg tgttatttca gtcaaagtct        60
     tttgatcctt atccaaatat gactacatcc gctgagaagt tagcaaagtt ggagcagtta       120
     aggaaagaaa ggtcagctgt cattcaaaaa ccgacagttc aggcgagctc ggagcaagtt       180
     aagacagaga agcctagggt caggaacaca gcgtatgata gtctagcagg agtgacgata       240
     ggaaagagag catcaaggaa atggtccgat gcagatatca aaagtattcc tatatatgat       300
     gtccatcagg tcccggctgc tcaagtcatt gctctaggga aagatctgct gacacagatt       360
     cagaacaact ctgtcaatac tgtcacagtg gactactgtt tagtgttggc agtatctata       420
     cctaagccag caatgacatc ttttgaacac ctcttaacac ctccttcttc agatcaaggt       480
     actaggctcg acttcacaca accgcaggca ggagtatcca acagatcagg gttgacggct       540
     atagaaaaga ggactctgga cgcaacccga aagaatttgt tgactgagac tgatgaggaa       600
     aagagggcta ggtacgaagc aataattaaa aagatggaag accaagaggc tggattaggc       660
     acatcaagga ctactgtagt aacctcggag accgaggcag cagcatacgg gtttttagcg       720
     gcaacattgc taaaactgta cgcgaaatca actgagtctt atatagccgg acttgcccag       780
     ataaggaaca gattcgcggc atggtatgat tgcccaaaag cagtgttaga tgctttccaa       840
     ccgacagagg cagctttggt gtcactgaga gcagcgtttg cccgcagacc cgaagtgtta       900
     tcgacatgga cactgtgggt tgctgtgaac gagaatagga cccctggact attggtcacc       960
     caacaagggt tgttgaatta cctagcttgc caacaattcg cttatcctgg tatgcacgca      1020
     tacactctgt tgatagaaat acatgagcat acaggaatga agtttagcga tttgttagtg      1080
     gagatggatt gtccggccac tcgcgcaggt gtgagggaag ctttggagtt gattagggat      1140
     tatgagataa ccaaggatca cccgaaacga acaacctatt ttcgatatgc caggaattgg      1200
     gatcctaagt acttcggggc actacaatca acagaatgca agaccctagt gtatgttgct      1260
     gcctccgtta gtaagaaggt ctctgcccaa ggtgcaaatg gggatccaat ggagatattt      1320
     gcgattaaaa atctggatgc aacgataaag gctaggttgg atcctgttgc agagaatatg      1380
     gcagggaaaa tattggatca gatgctcatg gatgagatgt ctggggcatc ttgggcgaca      1440
     aaagcagcag cccaataaac ggttatcatc tatctatgaa gctacagata cgtacttata      1500
     tataccctca actctatata catagttgat ttaagaaaa                             1539
//