ID   AJ717734; SV 1; linear; genomic RNA; STD; VRL; 1814 BP.
XX
AC   AJ717734;
XX
DT   01-JUN-2004 (Rel. 80, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Sweet potato mild mottle virus partial mRNA for polyprotein (NIb-CP gene),
DE   isolate Kum2
XX
KW   coat protein; NIb-CP gene; polymerase; polyprotein.
XX
OS   Sweet potato mild mottle virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1814
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (31-MAY-2004) to the INSDC.
RL   Mukasa S.B.B., Dept. of Plant Biology & Forest Genetics, Uppsala Genetics
RL   Center, SLU, Box 7080,, SE 750 07 Uppsala, SWEDEN, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; 6484ab2d63c2d0e27ff9b607868322f4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1814
FT                   /organism="Sweet potato mild mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Kum2"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Kumi District"
FT                   /db_xref="taxon:41459"
FT   CDS             <1..1506
FT                   /codon_start=1
FT                   /gene="NIb-CP"
FT                   /product="polyprotein"
FT                   /note="polyprotein for polymerase and coat protein"
FT                   /db_xref="GOA:Q6KB68"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6KB68"
FT                   /protein_id="CAG30742.1"
FT                   /translation="GNNSGQPSTVVDNTLILMIAMEYAIAKVFVTRPDIKYVCNGDDLL
FT                   INCPRGTASAISEHFKDAFADLSLNYDFDHVCDKITDVDFMSHSFMWLDDEQMYVPKLD
FT                   KERIVAILEWERSDEQFRTRSALNAAYIESFGYEDLMAEIEKFAHFWAEKHGLNDVLME
FT                   REKVKDLYVNEDFDASAFEKFYPETFSPFDVYVEPHASTSKTIEELQQELEDLDADTTT
FT                   TVVQRETQKARIRDQIETLRAQQIVRPSEAQLQPDVTPTQIVTFEPPRVSGFGALWIPR
FT                   QQRNYMTTAYIEKIKAYAPHSNLIESGLASEAQLTSWFENTCRDYQVSMDVFMSAILPA
FT                   WIVNCIINGTSQERTNEHTWRAVIMANMEDQEVLYYPIKPIIINAQPTLRQVMRHFGEQ
FT                   AVAQYMNSLQVGKPFTVKGAVTAGYANVQDAWLGIDFLRDTMKLTTKQMEVKHQIIAAN
FT                   VTRRKIRVFALAAPGDGDELDTERHVVDDVARGRHSLRGAQLD"
FT   3'UTR           1507..>1814
FT                   /gene="NIb-CP"
XX
SQ   Sequence 1814 BP; 538 A; 347 C; 448 G; 481 T; 0 other;
     gggaacaaca gtgggcagcc ctcaacagtt gtcgacaaca cgttgatctt gatgattgct        60
     atggaatacg cgatagctaa ggtttttgtc acacgccctg acatcaagta tgtatgtaat       120
     ggggacgacc tcttaattaa ttgcccaagg ggtactgcaa gcgccattag tgagcacttc       180
     aaggatgcat tcgcagactt aagcttgaac tatgatttcg atcacgtttg tgataagatt       240
     acagatgttg atttcatgag tcatagcttc atgtggctag atgatgagca aatgtatgta       300
     ccaaagctgg acaaggagcg aattgtagca attttggagt gggaaaggag tgatgagcaa       360
     ttcagaacaa ggagcgcctt gaacgctgct tacattgaaa gttttggata tgaagattta       420
     atggctgaga ttgagaaatt tgctcacttt tgggctgaaa agcacggact caatgacgtc       480
     ttgatggagc gggaaaaggt taaagatttg tacgttaatg aagattttga tgcgtcagcc       540
     tttgagaagt tctatccgga aacattttcg ccatttgatg tttatgttga accacatgca       600
     tcgacatcca agacaatcga agaactgcag caagaattgg aagatttgga tgcagacaca       660
     acaaccactg tggtccaaag ggaaacacag aaggcgagaa taagagatca aattgagaca       720
     cttagggcac aacagattgt gagaccttcg gaggcacaac tacagcctga cgtaactccc       780
     acgcaaattg tcacgtttga accaccaaga gtctccggat ttggtgcttt atggattccg       840
     cgccaacaaa ggaactacat gacgacagct tacatcgaga agattaaggc ttatgctcca       900
     cattcaaact tgattgaatc tggactagct agtgaagctc aattaactag ttggttcgag       960
     aacacatgta gggactacca agttagtatg gacgtcttca tgagtgcaat actgccagca      1020
     tggattgtca actgcataat caatggaaca tctcaggagc gaactaatga gcatacatgg      1080
     agagctgtga ttatggcaaa catggaagac caggaagtgc tttattaccc cataaagccc      1140
     ataattatca acgctcaacc aactttaagg caagtgatgc gtcattttgg cgaacaagcc      1200
     gtcgctcaat atatgaatag ccttcaagtt ggaaaacctt tcacagtgaa aggtgctgta      1260
     actgctggct acgctaatgt tcaagatgct tggctaggta ttgactttct tcgggacaca      1320
     atgaagttga caacaaaaca gatggaagtc aagcatcaaa tcattgcagc gaatgtaaca      1380
     aggcggaaaa tccgtgtttt tgctcttgcg gcgccgggag atggcgatga actggacaca      1440
     gaaaggcatg ttgttgacga tgttgctaga ggtcgtcata gtctgagagg agctcaactc      1500
     gactaaatga gcatgttatc tttaatttca actgcgtgtt tttatttcaa ttacgttcca      1560
     tgctttatgt ttgtgtgttg tggcacttga accaggtaca gctggcaggt gtttcggcat      1620
     ggtgtggtta gacaattggc acgcgccggt cgtctaagaa gcgctatgta tcacgtggtt      1680
     ggttaattca tagctcatat gggttaatca agaagcgttt atcgcccaaa agggcaccag      1740
     aaaatggttg cgtcattcgt ggcgtaatca gtttttggag cttggctagg taacttgtcg      1800
     cctatccaaa agcc                                                        1814
//