ID   AJ717733; SV 1; linear; genomic RNA; STD; VRL; 1811 BP.
XX
AC   AJ717733;
XX
DT   01-JUN-2004 (Rel. 80, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Sweet potato mild mottle virus partial mRNA for polyprotein (NIb-CP gene),
DE   isolate Tor2
XX
KW   coat protein; NIb-CP gene; polymerase; polyprotein.
XX
OS   Sweet potato mild mottle virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1811
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (31-MAY-2004) to the INSDC.
RL   Mukasa S.B.B., Dept. of Plant Biology & Forest Genetics, Uppsala Genetics
RL   Center, SLU, Box 7080,, SE 750 07 Uppsala, SWEDEN, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; 868d51d96065e54f6353800c19d9171a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1811
FT                   /organism="Sweet potato mild mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Tor2"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Tororo District"
FT                   /db_xref="taxon:41459"
FT   CDS             <1..1506
FT                   /codon_start=1
FT                   /gene="NIb-CP"
FT                   /product="polyprotein"
FT                   /note="polyprotein for polymerase and coat protein"
FT                   /db_xref="GOA:Q6KB69"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6KB69"
FT                   /protein_id="CAG30741.1"
FT                   /translation="GNNSGQPSTVVDNTLILMIAMEYAIAKVFVTRPDIKYVCNGDDLL
FT                   INCPRGVASAISEHFKDAFADLSLNYDFDHVCDKITDVDFMSHSFMWLDAEQMYIPKLD
FT                   KERIVAILEWERSDEQFRTRSALNAAYIESFGYEDLMAEIEKFAHFWAKKHGLNDVLME
FT                   REKVRDLYVNEDFDASAFEKFYPETFSPFDVYVEPHASTSKAIEELQKEMEDLDADTTI
FT                   TVVQRETQKARIREQIETLRAQQIVRPSEAQLQPDVNPTQIVTFEPPRVTGFGALWIPR
FT                   QQRNYMTPAYIEKIKAYVPHSNLIESGLASEAQLTSWFENTSRDYQVSMDVFMGTILPA
FT                   WIVNCIINGTSQERTNEHTWRAVIMANMEDQEVLYYPIKPIIINAQPTLRQVMRHFGEQ
FT                   AVAQYMNSLQVGKPLTVKGAVTAGYANVQDAWLGIDFLRDTMQLTTKQMEVKHQIIAAN
FT                   VTRRKIRVFALAAPGDGDELDTERHVVDDVARGRHSLRGAQLD"
FT   3'UTR           1507..>1811
FT                   /gene="NIb-CP"
XX
SQ   Sequence 1811 BP; 522 A; 338 C; 460 G; 491 T; 0 other;
     gggaataata gtgggcagcc ttcaacagtt gttgataaca cgttaattct gatgattgct        60
     atggaatacg cgatagctaa ggtttttgtc acacgtcctg acattaagta cgtctgcaat       120
     ggggacgacc ttctaattaa ttgtccaagg ggcgttgcaa gcgccattag tgagcacttc       180
     aaagacgcat tcgcagactt aagcttgaac tacgattttg atcatgtttg tgataaaatc       240
     acagacgttg attttatgag tcatagtttc atgtggctgg atgctgagca gatgtacata       300
     ccaaagctgg ataaggagcg aattgtggca attttggagt gggaaaggag tgatgagcaa       360
     ttcagaacga ggagcgccct gaacgctgct tatattgaga gttttggcta tgaagactta       420
     atggctgaga ttgagaaatt cgcacacttt tgggctaaaa aacatggtct taatgacgtc       480
     ttgatggagc gagagaaggt tagagacttg tacgttaatg aagatttcga cgcatcagct       540
     tttgaaaagt tctatccgga aacattttcg ccatttgacg tttatgttga accgcatgct       600
     tcgacatcca aggcaatcga ggagctacag aaggagatgg aggatttgga tgcagacaca       660
     acaattactg tggttcagag ggagacacag aaggcgagaa taagagaaca aatcgagaca       720
     cttagggcac aacaaattgt gagaccttct gaggcacagc tacagcctga cgtaaatccc       780
     acgcaaatcg tcacgtttga accaccaaga gtcactggat ttggcgcttt atggattccg       840
     cgccaacaaa ggaactacat gacgccagct tacatcgaga agataaaggc ttatgttcca       900
     cattcaaact tgattgaatc tggactagct agtgaagctc aattgaccag ttggttcgag       960
     aacacgagca gggattacca agttagtatg gatgttttca tgggtacaat tttgccagca      1020
     tggattgtta attgcataat taatgggaca tctcaggagc gcactaatga gcacacatgg      1080
     agagctgtga ttatggcgaa tatggaggat caagaagtgc tttattaccc catcaagccc      1140
     ataataatca atgctcaacc aactttgagg caggtgatgc gccatttcgg agaacaagct      1200
     gttgctcaat acatgaatag ccttcaagtt gggaaacctc ttacagtgaa gggcgccgta      1260
     actgctggct acgctaatgt tcaagatgct tggttaggta ttgactttct acgggacaca      1320
     atgcagttga caacaaaaca aatggaagtt aagcatcaaa ttatcgctgc gaacgtcaca      1380
     aggcggaaga tccgtgtttt tgctcttgca gcaccgggag atggcgatga actagacaca      1440
     gaaaggcatg tcgtcgacga tgtggctagg ggtcgtcaca gtctgagagg agctcaactc      1500
     gactaaatga gcgcgttatc tttaatttca actgcgtgtt tttattttaa ttacgtttta      1560
     tgttttgtgt ttgtttgttg tggcacttga accaggtaca gctggcaggt gtttcggcat      1620
     ggtgtggtta gacaattggt tcgcaccggt agtctaagaa gcgctatgta tcacgtggtt      1680
     ggttaattca tttgtatgga ttaatcaaga agcgtctatc gcccaaaagg gcaccagaaa      1740
     atggttgcgt cattcgtggc gtaatcagtt tttggagttt ggctaggtaa cttgtcgcct      1800
     atccaaaagc c                                                           1811
//