ID   AJ717732; SV 1; linear; genomic RNA; STD; VRL; 1817 BP.
XX
AC   AJ717732;
XX
DT   01-JUN-2004 (Rel. 80, Created)
DT   29-MAR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Sweet potato mild mottle virus partial mRNA for polyprotein (NIb-CP gene),
DE   isolate Kam2
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KW   coat protein; NIb-CP gene; polymerase; polyprotein.
XX
OS   Sweet potato mild mottle virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1817
RA   Mukasa S.B.B.;
RT   ;
RL   Submitted (31-MAY-2004) to the INSDC.
RL   Mukasa S.B.B., Dept. of Plant Biology & Forest Genetics, Uppsala Genetics
RL   Center, SLU, Box 7080,, SE 750 07 Uppsala, SWEDEN, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1111/j.1364-3703.2005.00267.x.
RX   PUBMED; 20565651.
RA   Tairo F., Mukasa S.B., Jones R.A.C., Kullaya A., Rubaihayo P.R.,
RA   Valkonen J.P.T.;
RT   "Unravelling the genetic diversity of the three main viruses involved in
RT   Sweet Potato Virus Disease (SPVD), and its practical implications";
RL   Mol. Plant Pathol. 6(2):199-211(2005).
XX
DR   MD5; 699b9232f412b8500cc7f1856cafe58c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1817
FT                   /organism="Sweet potato mild mottle virus"
FT                   /host="Ipomoea batatas"
FT                   /isolate="Kam2"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Kamuli District"
FT                   /db_xref="taxon:41459"
FT   CDS             <1..1506
FT                   /codon_start=1
FT                   /gene="NIb-CP"
FT                   /product="polyprotein"
FT                   /note="polyprotein for polymerase and coat protein"
FT                   /db_xref="GOA:Q6KB70"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6KB70"
FT                   /protein_id="CAG30740.1"
FT                   /translation="GNNSGQPSTVVDNTLILMIAMEYAIAKVFVTRPNIKYVCNGDDLL
FT                   INCPRSTANAISEHFKDAFADLSLNYDFDHVCDKITDVDFMSHSFMWLDAEQMYIPKLD
FT                   KERIVAILEWERSDEQFRTRSALNAAYIESFGYDDLMTEIEKFAHFWAKKHGLNDVLME
FT                   REKVKDLYVNEDFDVSAFEKFYPETFSPFDVYVEPHASTSKTIEELQKEMEDLDADTTI
FT                   TVVQRETQKARIREQIETLRAQQIVRPTEAQLQPDVTPTQIVTFEPPRVTGFGALWIPR
FT                   QQRNYMTTAYIEKIKAYVPHSNLIESGLASEAQLTSWIESTCRDYQVSMDVFMTTVLPA
FT                   WIVNCIINGTSQERTNEHTWRAVVMANMEDQEVIYYPIKPIIGNAQPTLRQVMRHFGEQ
FT                   AVAQYMNSLQVGKPFTVKGAVTAGYANVQDAWLGIDFLCDTMPLTTKQMKVKHQIIAAN
FT                   VTRRKIRVFALAAPGDGDELDTERHVVDDVARGRHSLRGAQLD"
FT   3'UTR           1507..>1817
FT                   /gene="NIb-CP"
XX
SQ   Sequence 1817 BP; 528 A; 335 C; 454 G; 500 T; 0 other;
     ggtaataata gtgggcagcc ctcaacggtt gttgataaca cgttgatctt gatgattgca        60
     atggaatatg caatagctaa ggtttttgtc acacgcccta acatcaagta tgtctgtaat       120
     ggggacgacc ttttaattaa ctgtccaagg agcactgcaa acgccattag tgaacacttc       180
     aaggacgcat tcgcagattt aagcttaaac tatgattttg atcatgtttg tgataaaatc       240
     acagatgttg atttcatgag tcatagcttc atgtggctag atgctgagca gatgtatata       300
     ccaaagttgg acaaggagcg aattgtggca attttggagt gggaaaggag tgatgagcaa       360
     ttcagaacga ggagcgctct taacgctgct tatattgaaa gctttggata tgatgatttg       420
     atgactgaga ttgagaaatt cgctcacttt tgggccaaaa agcacggtct caacgacgtc       480
     ttgatggagc gggagaaggt taaagactta tacgtcaatg aagattttga tgtgtcagcc       540
     tttgagaagt tctatccgga gacattctcg ccatttgatg tttatgtcga accacacgca       600
     tcgacatcta agacaatcga agaattgcag aaagagatgg aggatttgga tgcagacaca       660
     acaataactg tggttcaaag ggagacacag aaggcgagaa taagagaaca gattgagaca       720
     cttagggcac aacaaattgt gagacctact gaggcgcagc ttcagcctga cgtaactccc       780
     acgcaaattg ttacgtttga accaccaaga gtcactggat ttggcgcttt atggatccca       840
     cgccaacaaa gaaattacat gacgacagct tatattgaga agataaaggc ttatgttcca       900
     cactcaaact tgattgaatc tggactagct agtgaagctc agttgactag ttggatcgaa       960
     agcacgtgca gggactatca agttagtatg gacgtcttca tgactacagt actgccagca      1020
     tggattgtta attgtataat caatggaacg tctcaggagc gcactaatga gcacacatgg      1080
     agagctgtgg ttatggcgaa tatggaagat caggaggtga tttattaccc tatcaagccc      1140
     ataattggaa acgctcaacc aactttgagg caagtgatgc gtcattttgg cgagcaagcc      1200
     gtcgctcaat acatgaacag tctccaagtt ggaaaacctt tcacagtgaa gggcgccgta      1260
     actgctggtt atgctaatgt tcaagatgct tggttgggaa ttgactttct ctgtgacacg      1320
     atgccgttga caacaaaaca gatgaaagtc aagcaccaaa ttattgcagc gaacgttaca      1380
     aggcggaaaa ttcgtgtttt tgctcttgca gcaccgggag atggcgatga attagataca      1440
     gaaaggcatg ttgtcgatga tgttgctaga ggtcgtcaca gtctgagagg agctcaactc      1500
     gactaaatga gcacgttatc tttaatttca actgcgtgtt tttcttattt caattgcgtt      1560
     ttatgctttg tgtttgtttg ttgtggcgct tgaaccaggt acagctggca ggtgtttcgg      1620
     catggtgtgg ttggacaatt ggttcgcacc ggtagtctaa gaagcgccat gtatcacgtg      1680
     gttggttaat tcatattttg tatgggttaa tcaagaagcg tctatcgccc aaaagggcac      1740
     cagaaaatgg ttgcgtcatt cgtggcgtaa tcagtttttg gagtttggct aggtaacttg      1800
     tcgcctatcc aaaagcc                                                     1817
//