ID AJ717583; SV 1; circular; genomic DNA; STD; VRL; 2785 BP. XX AC AJ717583; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA A, complete DE sequence, isolate EACMZV-[K337] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2785 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; da0724b6c54f390ae4a9fda17eaca081. XX FH Key Location/Qualifiers FH FT source 1..2785 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K337]" FT /mol_type="genomic DNA" FT /country="Kenya:Machakos" FT /clone="K337FA-1[2002]" FT /db_xref="taxon:223275" FT CDS 174..470 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A880" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A880" FT /protein_id="CAJ78340.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMG" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A879" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A879" FT /protein_id="CAJ78341.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGRVRCVSEVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFKINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A878" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A878" FT /protein_id="CAJ78342.1" FT /translation="MDSRTGELITAPQATNGVFTWEITNPLYFAITTHDKRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKIWTTLRPPTGLFLRVFRSQVLKYLDMIGVISINT FT VLRSVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A877" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A877" FT /protein_id="CAJ78343.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAIRRRRVDLECGCSFYIHI FT NCINHGFSHRGTHHCASSNEWRFYLGNNKSPIFRNHHPRQETREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQDLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A876" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A876" FT /protein_id="CAJ78344.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHDALSQILNLPTPTNKKYIK FT VCRELHDDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDARSARGGCHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPPAPYVSPFLSSSFTNVPEELEVWVSENVMGSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKHQSLKAWALKNATFVTLHEPL FT FSSAHQSPTPHSEDQGHQT" FT CDS complement(2230..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A875" FT /protein_id="CAJ78345.1" FT /translation="MGNLISTCLFSSKANSHAQISDSSTWYPPHDQHISIRTFKELNPA FT PTSSPTSTKMGIPLSGANSRSTPDRLEAAATMLMTHVPKH" XX SQ Sequence 2785 BP; 730 A; 541 C; 721 G; 793 T; 0 other; accggatggc cgcgcccaaa aaagcaggtg gaccccacag gatggccgcg cctgtgaaag 60 aaagtggtcc ccgcgcactt gtttcggtca gccagtcata ttcacgcgtg gaagtctaga 120 tatttgttgt ttgtctttat agacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt aaacgatttc cctgaaaccg ttcacggttt ccgttccatg cttgcggtta 240 aatacctgtt acatcttgaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggctaa caggcccatg 480 taccggaagc ccaagatgta cagaatgtat cgaagcccag atgttcctaa gggctgtgaa 540 ggcccatgta aggttcagtc gtatgaacag agggatgatg ttaagcacac tggtagggtc 600 cgatgtgtca gtgaggttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgggcaag atttggatgg atgagaatat taagaagcaa 720 aaccatacga accatgttat gttcttcctc gtgcgagata gaaggcctta tggtccgagt 780 ccgcaagatt ttggacaagt gttcaacatg tttgataatg aacctacgac tgcaactgtg 840 aagaatgatc ttagggaccg gtatcaagtg ctgcgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagcgctg gttaagaggt tttttaagat taataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtgtatg cgactctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac agaacatgat caacagatcg aagtacagtg 1200 ttaatggaaa taacgcctat catgtctaaa tacttgagca cttgagatct aaatactctt 1260 aagaaaagac cagtcggagg ccgtaaggtc gtccagatct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggattgt gatgatgtcg 1380 tggttcatgt tcccgggtct cttgtcgtgg gtggtgattg cgaaatatag gggatttgtt 1440 atttcccagg taaaaacgcc attcgttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt taatatggat ataaaacgag cagccgcatt cgaggtctac 1560 gcgcctacgt ctgatggccc tggtcttcgc tgtgcggtgt tggactttga tgggcacttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaaggg 1680 attggtgctt ttcctcttcc agaaactctt tatatgatga tgttggtcct ggattgcata 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtcccg ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacacaaata attatgtggt cccaatgatc tggcccacat tgtcttccct gtacgactat 1980 caccctcaat aacaatacta ttaggtctcc aaggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaagt tcctcaggaa cgttagtaaa agaagaagac agaaatggag 2100 aaacataagg agctggtggc tcttgaaaaa tcctatctaa attactactt aaattatgat 2160 attgaaaaat aaattctttt gggagtttct ccttaataat tagaagtgct gctgccttgg 2220 aaccggagtt taatgcttcg gcacatgcgt cattagcatt gtggcagccg cctctagccg 2280 atctggcgtc gatctggaat tcgccccact cagtggtatc cccatctttg tcgatgtagg 2340 acttgacgtc ggagctggat ttagctcctt gaatgttcgg atggaaatgt gttgatcgtg 2400 tgggggatac caggtcgaag aatcgcttat ttgtgcatga gaatttgcct tcgaactgaa 2460 taagcatgtg gagatgaggt tgcccatcgt cgtgaagttc tctgcacact ttgatgtatt 2520 tcttgtttgt gggagttggg aggtttaata tttgggataa tgcgtcgtgt ttagatagag 2580 aacatttggg atatgtgaga aaatagtttt tggcctgtat tttaaaacgc ttggggggag 2640 tcatttatgc gagagcaatt ggagacacct cggttgatgt ctccacggaa ttggagacaa 2700 tatatagtgt ctccaaatgg cataatggta attaggtaga tctattttca aaatgtgaac 2760 caaaagcggc catccgtata atatt 2785 //