ID AJ717578; SV 1; circular; genomic DNA; STD; VRL; 2795 BP. XX AC AJ717578; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 5) XX DE East African cassava mosaic Kenya virus segment DNA A, complete sequence, DE isolate EACMKV-[K229] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2795 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; c3272c546b208577e1d42fc943848d57. XX FH Key Location/Qualifiers FH FT source 1..2795 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMKV-[K229]" FT /mol_type="genomic DNA" FT /country="Kenya:Kuria, Kehancha/Kurutinyange" FT /clone="K229FA-1[2002]" FT /db_xref="taxon:393599" FT CDS 173..529 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A898" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A898" FT /protein_id="CAJ78310.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 333..1106 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8A9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8A9" FT /protein_id="CAJ78311.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENVKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1103..1507) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8A8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8A8" FT /protein_id="CAJ78312.1" FT /translation="MDSRTGELITAPQAKNGVFTWDITNPLYFEITNHDKRPGNMNHDI FT ITLQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRYQVLKYLDMIGVISINT FT VLHAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1248..1655) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8A7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8A7" FT /protein_id="CAJ78313.1" FT /translation="MPPSSPSTSHCSQVPIKIQHRIAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHQPRQETREHEPRHHHTPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1564..2643) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8A6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8A6" FT /protein_id="CAJ78314.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALDQIRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNQRFFDLISPSRSAHFHPNIQGAKSSSDVKSYM FT DKDGDTIQWGEFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLDRIFQEPLVPYVSPFLSSSFTNVPGELDDWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEDKNQSLKAWALKNATFITLHEPL FT FSSAHQNPTPHSEDPGRQT" FT CDS complement(2196..2492) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8A5" FT /protein_id="CAJ78315.1" FT /translation="MKMGNLICMPSFSSRASTIVQTNDSSTSYPLPGQHISIQTFKELN FT QAPTSNPIWTRTATPSNGASFRSTDDLLEEDNNQPMTLTPRLLTQQISQRLLM" XX SQ Sequence 2795 BP; 718 A; 564 C; 719 G; 794 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gcccccacaa gatgaccgcg tccgtgaaag 60 aaagtggtcc cccccacttg ttttggtcgg ccagtcatat tcacgcgtga aagtctagat 120 atttgttgtt tgtctttata gacttcgtcg cgaagtagtg gagcgcgtca acatgtggga 180 tccattgttg aacgattttc ccgaaaccgt tcacggtttc cgttctatgc ttgctgttaa 240 atacctgtta catctggaac aggaatacga tcgcggtact gtcggggctg agtatatacg 300 tgatctaata ggggttctac ggtgtaagag ttatgtcgaa gcgaccagga gatataataa 360 tctcaacacc cgtatccaag gtgcggagga ggctgaactt cgacagccca tacacgaacc 420 gtgttgttgc ccccactgtc cgcgtcacca gaagcaaaat atgggccaac aggcccatgt 480 atcggaagcc caagatgtac agaatgtatc gaagcccaga tgtccctaag ggctgtgaag 540 gcccgtgtaa ggttcagtcc tatgaacaga gggatgatgt gaagcacact ggtatggtcc 600 gatgtgtcag tgatgttact cgtggatcag gcattaccca tagagtcggg aagaggtttt 660 gtgtgaagtc catatatata ttgggcaaga tctggatgga tgagaatgtc aagaagcaaa 720 atcatacgaa ccatgttatg ttcttccttg ttcgagatag aaggccttat gggccgagtc 780 ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctactact gcaactgtga 840 agaatgatct tagggaccgg tatcaggtgt tacgtaaatt ttatgcgact gttgttggtg 900 gaccctctgg gatgaaggaa caagctctgg ttaagaggtt ttttaggatc aataatcatg 960 tagtgtataa tcatcaggaa caggccaagt atgagaatca tactgagaat gcgttgttat 1020 tgtatatggc atgtacacat gcctcgaatc ctgtgtacgc tacgctgaaa atacgcatct 1080 atttctatga tgcagtgaca aattaataaa ggttgaattt tattgcatgt tgctccgtaa 1140 cttggagtgt gtttagtaat acatcgtaca gaacatgatc aacagcgtga agtacagtat 1200 taatggaaat aacgcctatc atatctaaat acttgagcac ttgatatcta aatactctta 1260 agaaaagacc agtctgaggc cgtaaggtcg tccagacctt gaagttgaga aaacacttgt 1320 gaatccccaa tgccttccgg atgttgtggt tgaaccgtat ctggagtgtg atgatgtcgt 1380 ggttcatgtt ccctggtctc ttgtcgtggt tggtgatttc gaaatagagg ggatttgtta 1440 tgtcccaggt aaaaacgcca ttctttgctt gaggcgcagt gatgagttcc cctgtgcgag 1500 aatccatggt tgatgcagtc gatatggaga tagaacgagc agccgcattc gaggtctacc 1560 cgcctacgtc tgacggcccg ggtcttcgct atgcggtgtt ggattttgat gggcacttga 1620 gaacaatggc tcgtggaggg tgatgaaggt ggcattcttt aaagcccagg ctttaaggga 1680 ctgattcttg tcctcgtcca gaaactcttt atatgatgat gttggtcctg gattgcaaag 1740 gaagatagtg ggaatgccgc ctttaatttg aattggcttc ccgtacttgg tattactttg 1800 ccagtccctt tgggccccca tgaattcttt gaagtgtttg aggtagtggg ggtcgacgtc 1860 atcaatgacg ttgtaccagg cgtcgttgct gtagaccttt ggactaagat ccaggtgtcc 1920 acacaagtag ttgtgtggtc ccagagatcg ggcccacatc gtcttccctg tcctactatc 1980 gccctcgatg acgatactac tcggtctcca tggccgcgca gcggaaccca tcacgttttc 2040 ggaaacccaa tcgtcaagtt ccccaggaac gttagtgaaa gaagaagaaa gaaagggaga 2100 aacataagga accagaggct cttgaaaaat cctatctaaa ttgctattta aattatgaaa 2160 ctgtaaaaca aaatcttttg gcgctagttc ccttattaca ttaagagcct ctgacttatt 2220 tgctgagtta agagccttgg cgtaagcgtc attggctgat tgttgtcctc ctcgagcaga 2280 tcgtccgtcg atctgaaact cgccccattg gatggtgtcg ccgtccttgt ccatatagga 2340 tttgacgtcg gagcttgatt tagctccttg aatgtttgga tggaaatgtg ctgaccggga 2400 aggggatatg aggtcgaaga atcgttggtt tgtacaattg tacttgccct cgaactgaat 2460 gagggcatgc agatgaggtt ccccattttc atggagttct ctgcagatct tgatgaacaa 2520 tttatttgtt ggggtttgga gttgtcggat ctgatccaat gcctcctctt tggatagaga 2580 gcatttggga taagtcagga aatagttttt ggctttgatg ctaaaacgac cagcccttgg 2640 cattttcgct gtcgtatagc aatcgggggg cactcaaagt ctgtagcaat cgggggaatg 2700 gggggcaatt tatatgatgc cccctaaatg gcatttatgt aatatcctca ttgaatttga 2760 atttcaaacg tgaaagcggc catccgtata atatt 2795 //