ID AJ717576; SV 1; circular; genomic DNA; STD; VRL; 2798 BP. XX AC AJ717576; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 5) XX DE East African cassava mosaic Kenya virus segment DNA A, complete sequence, DE isolate EACMKV-[K307] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Kenya virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2798 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 758015f8d80c5f3a20f6b0c95b5fab09. XX FH Key Location/Qualifiers FH FT source 1..2798 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMKV-[K307]" FT /mol_type="genomic DNA" FT /country="Kenya:Machakos, Matuu/Kikumini" FT /clone="K307FA-4[2002]" FT /db_xref="taxon:393599" FT CDS 175..531 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8C2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8C2" FT /protein_id="CAJ78298.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQIMGQQTHVS FT EAQDVQNVSKPRCP" FT CDS 335..1108 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8C1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8C1" FT /protein_id="CAJ78299.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKLWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENVKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1105..1509) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8C0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8C0" FT /protein_id="CAJ78300.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFEITNHDKRPGTMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFRVWTTLRPQTGLFLRVFRYQVLKYLDMIGVISINT FT VLQAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1250..1657) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8B9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8B9" FT /protein_id="CAJ78301.1" FT /translation="MPPSSPSTSHCSLVPIKVQHCTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQEARDHEPRHHHTPDTVQPQ FT PPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1566..2645) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8B8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8B8" FT /protein_id="CAJ78302.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALDQIRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNNRFFDLISPSRSTHFHPNIQGAKSSSDVQSYM FT DKDGDTIQWGKFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLDRIFQEPLTPYVSPFLSSSFTNVPEELEDWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDYVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFITLHEPL FT FSSAHQSPTLHSEDQGRQT" FT CDS complement(2198..2494) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8B7" FT /protein_id="CAJ78303.1" FT /translation="MKMGNLICMPSFSSRANTIVPTIDSSTSYPLPGQHISIQTFRELN FT QAPTSSPIWTRTGTPSNGASFRSTDDLLEEDNNQPMTLTQRLLTQQISQRLLM" XX SQ Sequence 2798 BP; 716 A; 564 C; 728 G; 790 T; 0 other; accggatggc cgcgcccgaa aaaagcaggt ggaccccaca ggatggccgc gcccgtgaaa 60 gaaagtggtc cctgcgcact tgttttggtc ggccagtcat attcacgcgt gaaagtctag 120 atatttgttg tttgtcttta tagacttcgt cgcgaagtag tggagcgcgt caacatgtgg 180 gatccattgt tgaacgactt tcccgaaacc gttcacggtt tccgttctat gcttgctgtt 240 aaatacctgt tacatctgga acaggaatac gatcgcggta ctgtcggggc tgagtatata 300 cgggatctaa taggggttct acggtgtaag agttatgtcg aagcgaccag gagatataat 360 aatctcaaca cccgtatcca aggtgcggag gaggctgaac ttcgacagcc catacacgaa 420 ccgtgttgtt gcccccactg tccgcgtcac cagaagcaaa ttatgggcca acagacccat 480 gtatcggaag cccaagatgt acagaatgta tcgaagccca gatgtcccta agggctgtga 540 aggcccatgt aaggttcagt cctatgaaca gagggatgat gttaagcaca ctggtatggt 600 ccgatgtgtc agtgatgtta cgcgtgggtc aggcattacc catagagtcg ggaagaggtt 660 ttgtgttaag tccatatata tattgggcaa gatctggatg gatgagaatg tcaagaagca 720 aaatcacacg aaccatgtga tgttcttcct cgtgcgagat agaaggccgt atggtccgag 780 tcctcaagat tttgggcaag tgttcaacat gtttgataat gaaccaacta ctgcaactgt 840 gaagaatgat cttagggacc ggtatcaggt gttacgtaaa ttctatgcga ctgttgttgg 900 tggaccctct gggatgaagg aacaagctct ggttaagagg ttttttagga tcaataatca 960 tgttgtgtat aatcatcagg aacaggccaa gtatgagaat catactgaga atgcgttgtt 1020 attgtatatg gcatgtacac atgcctctaa tcctgtgtac gctacgctga aaatacgcat 1080 ctatttttat gatgcagtga caaattaata aaggttgaat tttattgcat gttgctccgt 1140 aacttggagc gtgtttagta atacatcgta cagaacatga tcaacagctt gaagtacagt 1200 gttaatggaa ataacgccta tcatatctaa atacttgagc acttgatatc taaatactct 1260 taagaaaaga ccagtctgag gccgtaaggt cgtccagacc ctgaagttga gaaaacactt 1320 gtgaatcccc aatgccttcc ggaggttgtg gttgaaccgt atctggagtg tgatgatgtc 1380 gtggttcatg gtccctggcc tcttgtcgtg gttggtgatt tcgaaataga ggggatttgt 1440 tatttcccag gtaaaaacgc cattctttgc ttgaggcgca gtgatgagtt cccctgtgcg 1500 agaatccatg gttgatgcag tcgatatgga gatagaacga gcagccgcat tcgaggtcta 1560 cccgcctacg tctgacggcc ctggtcttcg ctgtgcagtg ttggactttg atgggcacta 1620 gagaacaatg gctcgtggag ggtgatgaag gtggcattct ttaaagccca ggctttaagg 1680 gactggttct tttcctcgtc cagaaactct ttatatgatg atgttggtcc gggattgcag 1740 aggaagatag tgggaatgcc gcctttaatt tgaattggct tcccgtactt tgtattgctt 1800 tgccagtctc tttgggcccc catgaattct ttgaagtgtt tgaggtagtg ggggtcgacg 1860 taatcaatga cgttgtacca ggcgtcgttg ctgtagacct ttggactaag atccaggtgt 1920 ccacacaagt agttgtgtgg tcccagagag cgggcccaca tcgtcttccc cgtcctacta 1980 tcgccctcga tgacgatact actcggtctc catggccgcg cagcggaacc catcacgttc 2040 tcggaaaccc aatcttcaag ttcctcagga acgttagtga aagaagatga aagaaatgga 2100 gaaacataag gagtcagagg ctcttgaaaa atcctatcta aattgctatt taaattatga 2160 aactgtaaaa caaaatcttt tggagctagt tcgcgtatta cattaagagc ctctgactta 2220 tttgctgagt taagagcctt tgcgtaagcg tcattggctg attgttgtcc tcctcgagca 2280 gatcgtccgt cgatctgaaa cttgccccat tggatggtgt ccccgtcctt gtccatatag 2340 gactggacgt cggagcttga tttagctccc tgaatgtttg gatggaaatg tgttgaccgg 2400 gaaggggata tgaggtcgaa gaatcgattg ttggtacaat tgtatttgcc ctcgaactga 2460 atgagggcat gcagatgagg ttccccattt tcatggagtt ctctgcatat cttgatgaac 2520 aatttattgg ttggggtttg gagctgtcgg atttgatcca atgcctcttc tttggataga 2580 gagcatttgg gatatgttag gaaatagttt ttggctttga tgctaaaacg accagccctt 2640 ggcattttcg ctgtcgtata gcaatcgggg ggcactcaaa gtctgtagca atcgggggaa 2700 aggggggcaa tttatatgat gccccctaaa tggcatttat gtaaaatcct cattgaattt 2760 gaaattcaaa cgtggaaagc ggccatccgt ctaatatt 2798 //