ID AJ717573; SV 1; circular; genomic DNA; STD; VRL; 2797 BP. XX AC AJ717573; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 5) XX DE East African cassava mosaic Kenya virus segment DNA A, complete sequence, DE isolate EACMKV-[K301] XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; AC1 protein; KW AC2 protein; AC3 protein; AC4 protein; AV1 protein; AV2 protein. XX OS East African cassava mosaic Kenya virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2797 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 54f2231c8306662ee3151f84d108f6e4. XX FH Key Location/Qualifiers FH FT source 1..2797 FT /organism="East African cassava mosaic Kenya virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMKV-[K301]" FT /mol_type="genomic DNA" FT /country="Kenya:Machakos, Kathiani/Kawethei" FT /clone="K301FA-3[2002]" FT /db_xref="taxon:393599" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8E0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8E0" FT /protein_id="CAJ78280.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCGCPHCPRHQKQNMGQQTHVS FT EAQDVQNVSKPRCP" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8A9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8A9" FT /protein_id="CAJ78281.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENVKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8D8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8D8" FT /protein_id="CAJ78282.1" FT /translation="MDSRTGELITAPQARSGVFTWEITNPLYFEITNHVKRPGHMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFRVWTTLRPQTGLFFRVFRYQVLKYLDMIGVISINT FT VLLAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8D7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8D7" FT /protein_id="CAJ78283.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQEARAHEPRHHHTPDTVQPQ FT PPEGIGDSQVFSQLQGLDDLTASDWSFLQSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8D6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8D6" FT /protein_id="CAJ78284.1" FT /translation="MPRAGRFSIKAKNYFLTYPKCSLSKEEALDQIRQLQTPTNKLFIK FT ICRELHENGEPHLHALIQFEGKYNCTNHRFFDLISPSRSAHFHPNIQGAKSSSDVQSYM FT DKDGDTIQWGKFQIDGRSARGGQQSANDAYAKALNSANKSEALNVIRELAPKDFVLQFH FT NLNSNLDRIFQEPLTPYVSPFLSSSFTNVPEELEDWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSEDQGRQT" FT CDS complement(2197..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8D5" FT /protein_id="CAJ78285.1" FT /translation="MGNLICMPSFSSRASTIVPTIDSSTSYPLPGQHISIPTFRELNQA FT PTSSPIWTRTETPSNGASFRSTDDLLEEDNNPPMTLTPRLLTQQISQKLLM" XX SQ Sequence 2797 BP; 714 A; 566 C; 735 G; 782 T; 0 other; accggatggc cgcgcccgtt aaagcaggtg gaccccatcg gatggccgcg cccgtgaaag 60 aaagtggtcc ctgcgcactt attttggtcg gccagtcata ttcacgcgtg aaagtctaga 120 tatttgttgt ttgtctttat agacttcgtc gcgaagtagt ggagtgcgtc aacatgtggg 180 atccattgtt gaacgacttt cccgaaaccg ttcacggttt ccgttctatg cttgctgtta 240 aatacctgtt acatctggaa caggaatacg atcgcggtac cgtcggggct gagtatatac 300 gggacctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgtggttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa cagacccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc ctatgaacag agggatgatg ttaagcacac tggtatggtc 600 cgatgtgtca gtgatgttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttt 660 tgtgttaagt ccatatatat attgggcaag atctggatgg atgagaatgt caagaagcaa 720 aatcacacga accatgtgat gttcttcctc gttcgagata gaaggccgta tggtccgagt 780 cctcaagatt ttgggcaagt gttcaacatg tttgataatg aaccaactac tgcaactgtg 840 aagaatgatc ttagggaccg gtaccaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagctctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctctaat cctgtgtacg ctacgctgaa aatacgcatc 1080 tatttttatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac agaacatgat caacagctag aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cttgatatct aaatactctg 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagaccc tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gaggttgtgg ttgaaccgta tctggagtgt gatgatgtcg 1380 tggttcatgt gccctggcct cttgacgtgg ttggtgattt cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc actccttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgacggccc tggtcttcgc tgtgcggtgt tggactttga tgggcactag 1620 agaacaatgg ctcgtggagg gtgatgaagg tggcattctt taaagcccag gctttaaggg 1680 actggttctt ttcctcgtcc agaaactctt tatatgatga tgttggtccg ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt tccgtacttt gtattgcttt 1800 gccagtctct ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactaaga tccaggtgtc 1920 cacacaagta gttgtgtggt cccagagagc gggcccacat cgtcttcccc gtcctactat 1980 cgccctcgat gacgatacta ctgggtctcc atggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca atcttcaagt tcctcaggga cgttagtgaa agaagatgaa agaaatggag 2100 aaacataagg agtcagaggc tcttgaaaaa tcctatctaa attgctattt aaattatgaa 2160 actgtaaaac aaaatctttt ggagctagtt cgcgtattac attaagagct tctgacttat 2220 ttgctgagtt aagagccttg gcgtaagcgt cattggcgga ttgttgtcct cctcgagcag 2280 atcgtccgtc gatctgaaac ttgccccatt ggatggtgtc tccgtccttg tccatatagg 2340 actggacgtc ggagcttgat ttagctccct gaatgttggg atggaaatgt gctgaccggg 2400 aaggggatat gaggtcgaag aatcgatggt tggtacaatt gtacttgccc tcgaactgaa 2460 tgagggcatg cagatgaggt tccccatttt catggagttc tctgcagatc ttgatgaaca 2520 atttatttgt tggggtttgg agttgtcgga tttgatccaa tgcctcctct ttggatagag 2580 agcatttggg atatgttagg aaatagtttt tggctttgat gctaaaacga ccagcccttg 2640 gcatgttctc tgtcgtatag caatcggggg gcactcaaag tctgtagcaa tcgggggaaa 2700 ggggggcaat ttatatgatg ccccctaaat ggcatttatg taatatcctc attgaatgtg 2760 aaattcaaac gtggaaagcg gccatccgta taatatt 2797 //