ID AJ717568; SV 1; circular; genomic DNA; STD; VRL; 2785 BP. XX AC AJ717568; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA A, complete DE sequence, isolate EACMZV-[K212] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2785 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; ccc81ddba76f1d56c51b74ef0b6406f9. XX FH Key Location/Qualifiers FH FT source 1..2785 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K212]" FT /mol_type="genomic DNA" FT /country="Kenya:Kwale, Msambweni/Shauri Moyo" FT /clone="K212FA-36[2002]" FT /db_xref="taxon:223275" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8G9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8G9" FT /protein_id="CAJ78250.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCS" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8G8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8G8" FT /protein_id="CAJ78251.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGPGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFKINNHIVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8G7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8G7" FT /protein_id="CAJ78252.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFEITNHDRRPGNMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFKVWTTLRPQTGRFLRVFKYQVLKYLDMIGVISINT FT VLQAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8G6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8G6" FT /protein_id="CAJ78253.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSQEWRFYLGNNKSPLFRNHQPRQEAREHEPRHHHTPDTVQPQ FT PEEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8G5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8G5" FT /protein_id="CAJ78254.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHDALSQILNIPTPTNKKYIK FT VCRELHDDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTQSTHFHPNIQGAKSSSDVKYYL FT DKDGDTTEWGEFQIDARSARGGCHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPPAPYVSPFLSSSFTNVPEELEVWVSENVMGSAARPWRPNSIVIEGD FT SRTGKTLWARSLGPHNYLCGHLDLGPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWASKNATFITLHEPL FT FSSAHQSPTPHSEDQGRQT" FT CDS complement(2230..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8G4" FT /protein_id="CAJ78255.1" FT /translation="MGNLISTCLFSSKANSHAQISDSSTWYPQHNPHISIRTFKELNPA FT PTSSTTSTKMGIPLSGANSRSTPDRLEAAATMLMTHVPKH" XX SQ Sequence 2785 BP; 722 A; 548 C; 727 G; 788 T; 0 other; accggatggc cgcgccagaa aaagcaggtg gaccccacag gatggccgcg cccgtgaaag 60 aaagtggtcc ccgcgcactt gtttcggtcg gccagtcata ttcacgcgtg gaagtctaga 120 tatttgttgt gtgtctttat agacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt aaacgatttc cctgaaaccg ttcacggttt ccgttccatg cttgctgtta 240 aatacctgtt acatcttgaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgttcctaa gggctgtgaa 540 ggcccatgta aggtgcagtc gtatgaacag agggatgatg ttaagcacac tggtatggtt 600 cgatgtgtca gtgatgttac gcgtgggcca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aatcatacga accatgttat gttcttcctc gttcgagata gaaggcctta tgggccgagt 780 cctcaagatt ttggacaagt gttcaacatg tttgataatg aaccgactac tgcaaccgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagcgcta gttaagaggt tttttaagat caataatcat 960 atagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcgaat cctgtgtatg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagtg tgtttagtaa tacatcgtac agaacatgat caacagcttg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cctgatattt aaatactctt 1260 aagaaacgac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttcct caggttgtgg ttgaaccgta tctggagtgt gatgatgtcg 1380 tggttcatgt tccctggcct cctgtcgtgg ttggtgattt cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc attcttggct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgacggccc tggtcttcgc tgtgcggtgt tggactttga tgggcactag 1620 agaacaatgg ctcgtggagg gtgatgaagg tggcattctt tgaagcccag gctttaaggg 1680 actgattctt ttcctcgtcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgcca cctttaattt gaatgggctt cccgtacttt gtattgcttt 1800 gccagtctct ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggaccgaga tccaggtgtc 1920 cacataagta gttgtgtgga cccaaagagc gggcccacag tgtcttcccc gtcctactat 1980 cgccctcgat gacgatacta ttaggtctcc atggtcgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaagt tcctcaggaa cgttagtaaa agaagaagac agaaaaggag 2100 aaacataagg agctggtggc tcttgaaaaa tcctatctaa attactactt aagttatgat 2160 attgaaaaat aaattctttt gggagtttct ccttaataat tagaagtgcg gctgccttgg 2220 aacctgagtt taatgcttcg gcacatgcgt cattagcatt gtggcagccg cctctagccg 2280 atctggcgtc gatctggaat tcgccccact cagtggtatc cccatctttg tcgaggtagt 2340 acttgacgtc ggagctggat ttagctcctt gaatgttcgg atggaaatgt gtggattgtg 2400 ttggggatac caggtcgaag aatcgcttat ttgtgcatga gaatttgcct tcgaactgaa 2460 taagcatgtg gagatgaggt tgcccatcgt cgtgaagttc tcggcacact ttgatgtatt 2520 tcttgtttgt gggagttggg atgtttaata tttgggataa tgcgtcgtgt ttagatagag 2580 aacatttggg atatgtgaga aaatagtttt tggcctgtat tttaaaacgc ttggggggag 2640 tcatttatgc gagagcaatt ggagacacct cggttgatgt ctctacggaa ttggagacaa 2700 tatatagtgt ctccaaatgg cataatggta attaggtaga tctattttca aaatttgaac 2760 caaaagcggc catccgtata atatt 2785 //