ID AJ717563; SV 1; circular; genomic DNA; STD; VRL; 2784 BP. XX AC AJ717563; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA A, complete DE sequence, isolate EACMZV-[K270] XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; AC1 protein; KW AC2 protein; AC3 protein; AC4 protein; AV1 protein; AV2 protein. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2784 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 32351458a163c1bc15693fa8848eec35. XX FH Key Location/Qualifiers FH FT source 1..2784 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K270]" FT /mol_type="genomic DNA" FT /country="Kenya:Makueni, Kibwezi" FT /clone="K270FA-2[2002]" FT /db_xref="taxon:223275" FT CDS 174..470 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8J9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8J9" FT /protein_id="CAJ78220.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLITRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMG" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8J2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8J2" FT /protein_id="CAJ78221.1" FT /translation="MSKRPGDIIISSPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSEVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFKINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8J7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8J7" FT /protein_id="CAJ78222.1" FT /translation="MDSRTGELITAPQATNGVFTWEITNPLYFAITTHDKRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKVWTTLRPPTGLFLRVFRSQVLKYLDMIGVISINT FT VLRSVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8J0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8J0" FT /protein_id="CAJ78223.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAIRRRRVDLDCGCSFYIHI FT NCINHGFSHRGTHHCASSNEWRFYLGNNKSPIFRNHHPRQETREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1660..2643) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8J5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8J5" FT /protein_id="CAJ78224.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHDALSQILNLPTPTNKKYIK FT VCRELHDDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDARSARGGCHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPPARYVSPFLSSSFTNVPEELEVWVSENVMGSAARPWRPNSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDTSTPTTSNTSKNSWGPNGTG FT KAIQSTGSQFKLKAAFPLSSSAIQDQHHHIKSFWKRKRTNPLKPGL" FT CDS complement(2229..2486) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8V379" FT /protein_id="CAJ78225.1" FT /translation="MGNLISTCLFSSKANSHAQISDSSTWYPQHDQHISIRTFKELNPA FT PTSSPTSTKMGIPLSGANSRSTPDRLEAAATMLMTHVPKH" XX SQ Sequence 2784 BP; 728 A; 540 C; 718 G; 798 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacag gatggccgcg cccgtgaaag 60 aaagtggtcc ccgcgcactt gtttcggtca gccagtcata ttcacgcgtg gaagtctaga 120 tatttgttgt ttgtctttat agacttcgtc gcgaagtaga ggagcgcgtc aacatgtggg 180 atccattgtt aaacgatttc cctgaaaccg tccacggttt ccgttccatg cttgctgtta 240 aatacctgtt acatcttgaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcatcac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggctaa caggcccatg 480 taccggaagc ccaagatgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc gtatgaacag agggatgatg ttaagcacac tggtatggtc 600 cgatgtgtca gtgaggttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgggcaag atttggatgg atgagaatat taagaagcaa 720 aaccatacga accatgttat gttcttcctc gtgcgagata gaaggcctta tggtccgagt 780 ccgcaagatt ttggacaagt gttcaacatg tttgataatg aacctacgac tgcaactgtg 840 aagaatgatc ttagggaccg gtatcaagtg ttgcgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagcgctg gttaagaggt tttttaagat taataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtgtatg cgactctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac agaacatgat caacagatcg aagtacagtg 1200 tttatggaaa taacgcctat catgtctaaa tacttgagca cttgagatct aaatactctt 1260 aagaaaagac cagtcggagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggattgt gatgatgtcg 1380 tggttcatgt tccctggtct cttgtcgtgg gtggtgattg cgaaatatag gggatttgtt 1440 atttcccagg taaaaacgcc attcgttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt taatatggat ataaaacgag cagccgcagt cgaggtctac 1560 tcgcctacgt ctgatggccc tggtcttcgc tgtgcggtgt tggactttga tgggcacttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaaggg 1680 attggttctt ttcctcttcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtcccg ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 atcaatgacg ttgtaccagg cgtcgttgct gtagaccttt ggactgagat ccaggtgtcc 1920 acacaaataa ttatgtggtc ccaatgatct ggcccacatt gtcttccctg tacgactatc 1980 accttcaaga acaatactat taggtctcca aggccgcgca gcggaaccca tcacgttctc 2040 ggaaacccag acttcaagtt cctcaggaac gttagtaaaa gaagaagaca gaaatggaga 2100 aacataacga gctggtggct cttgaaaaat ccgatctaaa ttactactta aattatgata 2160 ttgaaaaata aattcttttg ggagtttctc cttaataatt agaagtgctg ctgccttgga 2220 accggagttt aatgcttcgg cacatgcgtc attagcattg tggcagccgc ctctagccga 2280 tctggcgtcg atctggaatt cgccccactc agtggtatcc ccatctttgt cgatgtagga 2340 cttgacgtcg gagctggatt tagctccttg aatgttcgga tggaaatgtg ttgatcgtgt 2400 tggggatacc aggtcgaaga atcgcttatt tgtgcatgag aatttgcctt cgaactgaat 2460 aagcatgtgg agatgaggtt gcccatcgtc gtgaagttct ctgcacactt tgatgtattt 2520 tttgtttgtg ggagttggga ggtttaatat ttgggataat gcgtcgtgtt tagatagaga 2580 acatttggga tatgtgagaa aatagttttt ggcttgtatt ttaaaacgct tggggggagt 2640 catttatgcg agagcaattg gagacacctc ggttgatgtc tctacggaat tggagacaat 2700 atatagtgtc tccaaatggc ataatggtaa ttaggtagat ctattttcaa aatttgaacc 2760 aaaagcggcc atccgtataa tatt 2784 //