ID AJ717562; SV 1; circular; genomic DNA; STD; VRL; 2785 BP. XX AC AJ717562; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA A, complete DE sequence, isolate EACMZV-[K19] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2785 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 3e1910e17c12bc76e24825e0db94fdc4. XX FH Key Location/Qualifiers FH FT source 1..2785 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K19]" FT /mol_type="genomic DNA" FT /country="Kenya:Malindi, Fulunzi" FT /clone="K19AFA-2[2001]" FT /db_xref="taxon:223275" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8K5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8K5" FT /protein_id="CAJ78214.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYERGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPVHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8K4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8K4" FT /protein_id="CAJ78215.1" FT /translation="MSKRPGDIIISTLVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8K3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8K3" FT /protein_id="CAJ78216.1" FT /translation="MDSRTGELITAPQATNGVFTWEITNPLYFAITNHDKRPANMNHDI FT ITIQIRFNHNIRRTLGIHKCFLNFKVWTTLRPQTGLFLRVFRSQVLKYLDMIGVISINT FT VLQSVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8K2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8K2" FT /protein_id="CAJ78217.1" FT /translation="MPPSSPSTSHCSHVPIKVQHRTAKTRAIRRRRVDLECGCSFYIHI FT NCINHGFSHRGTHHCASSNEWRFYLGNNKSPVFRNHQPRQEASEHEPRHHHNPNTVQPQ FT HPEDIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8K1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8K1" FT /protein_id="CAJ78218.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHEALSQILNIPTPTNKKYIK FT VCRELHDDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDARSARGGCHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPPAPYVSPFLSSSFTNVPEELEVWVSENVMGSAARPWRPSSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLAEEKNQSLKAWALKNATFVTLHEPL FT FSRAHQSPTPHSENQGHQT" FT CDS complement(2230..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8K0" FT /protein_id="CAJ78219.1" FT /translation="MGNLISTCLFSSKANSHAQISDSSTWYPQHDRHISIRTFKELNPA FT PTSSPISTKMGIPLSGANSRSTPDRLEAAATMLMTHVPKH" XX SQ Sequence 2785 BP; 732 A; 549 C; 716 G; 788 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacca tatggccgcg cccgtgaaag 60 aaagtggtcc ccgcgcactt gtttcggtca gccagtcata ttcacgcgtg gaagtctaga 120 tatttgttgt ttgtctttat aaacttcgtc gtgaagtagt ggagcgcgtc aacatgtggg 180 acccattgtt aaacgatttc cctgaaaccg ttcacggttt ccgttccatg cttgctgtga 240 aatacctgtt acatcttgaa caggaatacg agcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac tcgtatccaa ggtgcggagg aggctgaact tcgacagccc gtacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc gtatgaacag agggatgatg tgaagcacac tggtatggtt 600 cgatgtgtca gtgatgttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aaccatacga accatgttat gtttttcctc gtgcgagata gaaggccgta tggtccgagt 780 ccgcaagatt ttggacaagt gttcaacatg tttgataatg aacctacaac tgcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg gaatgaagga acaagcgctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtgtacg ctacactgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac agaacatgat caacagattg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cttgagatct aaatactctt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgtcctccg gatgttgtgg ttgaaccgta tttggattgt gatgatgtcg 1380 tggttcatgt tcgctggcct cttgtcgtgg ttggtgattg cgaaatacag gggatttgtt 1440 atttcccagg taaaaacgcc attcgttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt taatatggat atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgatggccc tggttttcgc tgtgcggtgt tggactttga tgggcacgtg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaaggg 1680 actggttctt ttcctcagcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtcccg ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacacaaata attatgtggt cccaaggacc tggcccacat tgtcttccct gtacgactat 1980 caccctcaat aacaatacta ctgggtctcc aaggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaagt tcctcgggaa cgttagtaaa agaagaagac agaaaaggag 2100 aaacataagg agctggtggc tcttgaaaaa tcctatctaa attactactt aagttatgat 2160 attgaaaaat aaattctttt gggagtttct ccttaataat tagaagtgct gctgccttgg 2220 aacctgagtt taatgcttcg gcacatgcgt cattagcatt gtggcagccg cctctagccg 2280 atctggcgtc gatctggaat tcgccccact cagtggtatc cccatctttg tcgatatagg 2340 acttgacgtc ggagctggat ttagctcctt gaatgttcgg atggaaatgt gtcgatcgtg 2400 ttggggatac caggtcgaag aatcgcttat ttgtgcatga gaatttgcct tcgaactgaa 2460 taagcatgtg gagatgaggt tgcccatcgt cgtgaagttc tctgcacact ttgatgtatt 2520 tcttgttcgt gggagttggg atgtttaata tttgggataa tgcttcgtgt ttagatagag 2580 aacatttggg atatgtgaga aaatagtttt tggcctgtat tttaaaacgc ttggggggag 2640 tcatctatgc gagagcaatt ggagacacct cggttgatgt ctctactgaa ttggagacaa 2700 tatatagtgt ctccaaatgg cataatggta attaggtaga actattttca aaatgtgaac 2760 caaaagcggc catccgtata atatt 2785 //