ID AJ717561; SV 1; circular; genomic DNA; STD; VRL; 2785 BP. XX AC AJ717561; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA A, complete DE sequence, isolate EACMZV-[K12] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2785 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 90f49e138a418f78d25e643eaf9c3228. XX FH Key Location/Qualifiers FH FT source 1..2785 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K12]" FT /mol_type="genomic DNA" FT /country="Kenya:Malindi, Malindi-B" FT /clone="K12AFA-1[2001]" FT /db_xref="taxon:223275" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8L1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8L1" FT /protein_id="CAJ78208.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCGCPHCPRHQKQNMGQQAHVP FT EAQDVQSVSKPRCP" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8L0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8L0" FT /protein_id="CAJ78209.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRVYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8K9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8K9" FT /protein_id="CAJ78210.1" FT /translation="MDSRTGELITAPQATNGVFTWEITNPLYFAITNHDKRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRSQVLKYLDMIGVISINT FT VLQSVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8K8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8K8" FT /protein_id="CAJ78211.1" FT /translation="MPPSSPSTSHCSQVPIKVLHRTAKTRAIRRRRVDLECGCSFYIHI FT NCINHGFSHRGTHHCASSNEWRFYLGNNKSPIFRNHQPRQEAREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8K7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8K7" FT /protein_id="CAJ78212.1" FT /translation="MTPPKRFKIQAKNYFLTYPKCSLSKHDALSQILNIPNPTNKKYIK FT VCRELHDDGQPHLHMLIQFEGKFSCTNKRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTTEWGEFQIDARSARGGCHNANDACAEALNSGSKAAALLIIKEKLPKEFIFQYH FT NLSSNLDRIFQEPLSPYVSPFLSSSFTNVPEELEVWVSENVMGSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFVTLHEPL FT FSSAHQSPTPHSEDQGHQT" FT CDS complement(2230..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8K6" FT /protein_id="CAJ78213.1" FT /translation="MGNLISTCLFNSKANSHAQISDSSTWYPQHDQPISIRTFKELNPA FT PTSSPTSTKMGIPLSGANSRSTPDRLEAAATMLMTHVPKH" XX SQ Sequence 2785 BP; 730 A; 546 C; 715 G; 794 T; 0 other; accggatggc cgcgcccgaa aaagaaggtg gaccccactg gatggccgcg cccgtgaaag 60 aaagtggtcc ccgctcactt gtttctgtca gccagtcata tttacgcgtg gaagtctaga 120 tatttgttgt ttgtctttat agacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt aaacgatttc cctgaaaccg ttcacggttt ccgttccatg cttgctgtta 240 aatacctgtt gcatcttgaa caggaatacg atcgcggtac tgtcggggcg gagtatatac 300 gggatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgtggttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 taccggaagc ccaagatgta cagagtgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc gtatgaacag agggatgatg tgaagcacac tggtatggtc 600 cgatgtgtca gtgatgttac tcgtgggtca ggcattaccc atagagtcgg gaagaggttc 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aaccatacga accatgttat gtttttcctc gtgcgagata gaaggcctta tggtccgagt 780 ccgcaagatt ttggacaagt gttcaacatg tttgataatg aacctactac tgcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctcgg ggatgaagga acaagcgctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaac cctgtgtatg ctactctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acctggagcg tgtttagtaa tacatcgtac agaacatgat caacagattg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cttgagatct aaatactctt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggattgt gatgatgtcg 1380 tggttcatgt tccctggcct cttgtcgtgg ttggtgattg cgaaatatag gggatttgtt 1440 atttcccagg taaaaacgcc attcgttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt taatatggat atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgatggccc tggtcttcgc tgtgcggtgt aggactttga tgggcacttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaagag 1680 actggttctt ttcctcatcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaattggctt cccgtacttt gtattgcttt 1800 gccagtcccg ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacacaaata attatgtggt cccaatgacc tggcccacat tgtcttccct gtacgactat 1980 caccctcaat aacaatacta ttgggtctcc aaggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaagt tcctcaggaa cgttagtaaa agaagaagac aaaaaaggag 2100 aaacataagg agatagtggc tcttgaaaaa ttctatccaa attactactt aagttatgat 2160 attgaaaaat aaattctttt gggagtttct ccttaataat tagaagtgct gctgccttgg 2220 aaccggagtt taatgcttcg gcacatgcgt cattagcatt gtggcagccg cctctagccg 2280 atctggcgtc gatctggaat tcgccccact cagtggtatc cccatctttg tcgatgtagg 2340 acttgacgtc ggagctggat ttagctcctt gaatgttcgg atggaaatgg gttgatcgtg 2400 ttggggatac caggtcgaag aatcgcttat ttgtgcatga gaatttgcct tcgaattgaa 2460 taagcatgtg gagatgaggt tgcccatcgt cgtgaagttc tctgcacact ttgatgtatt 2520 tcttgtttgt gggatttggg atgtttaata tttgggataa tgcgtcgtgt ttagatagag 2580 aacatttggg atatgtgaga aaatagtttt tggcctgtat tttaaagcgc ttggggggag 2640 tcatttatgc gagagcaatt ggagacacct cggttgatgt ctctactgaa ttggagacaa 2700 tatatagtgt ctccaaatgg cataatggta attaggtaga tctagtttca aaatttgaac 2760 caaaagcggc catccgtata atatt 2785 //