ID AJ717558; SV 1; circular; genomic DNA; STD; VRL; 2798 BP. XX AC AJ717558; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus segment DNA A, complete sequence, isolate DE EACMV-[K268] XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; AC1 protein; KW AC2 protein; AC3 protein; AC4 protein; AV1 protein; AV2 protein. XX OS East African cassava mosaic virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2798 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; d4c449f7969aea23999f8860f6ecbac4. XX FH Key Location/Qualifiers FH FT source 1..2798 FT /organism="East African cassava mosaic virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-[K268]" FT /mol_type="genomic DNA" FT /country="Kenya:Migori, Masala" FT /clone="K268FA-7[2002]" FT /db_xref="taxon:62079" FT CDS 171..527 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8M9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8M9" FT /protein_id="CAJ78190.1" FT /translation="MWDPLLNDFPETVRGFRCMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 331..1104 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8M8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8M8" FT /protein_id="CAJ78191.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENVKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKKFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1101..1505) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8M7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8M7" FT /protein_id="CAJ78192.1" FT /translation="MDSRTGELITAPQARNGVFTWDITNPLYFEITNHDKRPGNMNHDI FT ITLQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRYQVFKYLDMIGVISINT FT VLQAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1246..1653) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8M6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8M6" FT /protein_id="CAJ78193.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRIAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHQPRQETREHEPRHHHTPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1562..2641) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8M5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8M5" FT /protein_id="CAJ78194.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLQALSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEDIEVWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLRAWALKNATFITIHEPL FT FSSAHQSPTPHSEDPGRQT" FT CDS complement(2251..2484) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8M4" FT /protein_id="CAJ78195.1" FT /translation="MGCLISMFSSNSKASSNVPTRDSSISFPHPDQHISIRTFRALNHR FT PMSKLTLKREGNFLTMEFSKSMPEVQGGRANI" XX SQ Sequence 2798 BP; 720 A; 552 C; 725 G; 801 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccataa tggttgtgcc cgtgaaagaa 60 agtggtcccc cccacttgtt ttggtcggcc agtcatattc acgcgtgaaa gtctagatat 120 gtgtcgtttg tctttataga cttcgtcgcg aagtagtgga gcgcgtcaac atgtgggatc 180 cattgttgaa cgattttccc gaaaccgttc gcggtttccg ttgtatgctt gctgttaaat 240 acctgttaca tctggaacag gaatacgatc gcggtactgt cggggctgag tatatacgtg 300 atctaatagg ggtgctacgg tgtaagagtt atgtcgaagc gaccaggaga tataataatc 360 tcaacacccg tatccaaggt gcggaggagg ctgaacttcg acagcccata cacgaaccgt 420 gttgttgccc ccactgtccg cgtcaccaga agcaaaatat gggccaacag gcccatgtat 480 cggaagccca agatgtacag aatgtatcga agcccagatg tccctaaggg ctgtgaaggc 540 ccatgtaagg ttcagtccta tgaacagagg gatgatgtga agcacactgg tatggtccga 600 tgtgtcagtg atgttactcg tggatcaggc attacccata gagtcgggaa gaggttttgt 660 gtgaagtcca tatatatatt gggcaagatc tggatggatg agaatgtcaa gaagcaaaat 720 catacgaacc atgttatgtt cttccttgtg cgagatagaa ggccttatgg tccgagtcct 780 caagattttg gacaagtgtt caacatgttt gataatgaac ctactactgc aactgtgaag 840 aatgatctta gggaccggta tcaggtgtta cgtaaatttt atgcgacggt tgttggtgga 900 ccctctggga tgaaggaaca agctctggtt aagaagtttt ttaggatcaa taatcatgta 960 gtgtataatc atcaggaaca ggccaagtat gagaatcata ctgagaatgc gttgttattg 1020 tatatggcat gtacacatgc ctcgaatcct gtgtacgcta cgctgaaaat acgcatctat 1080 ttctatgatg cagtgacaaa ttaataaagg ttgaatttta ttgcatgttg ctccgtaact 1140 tggagtgtgt ttagtaatac atcgtataga acatgatcaa cagcttgaag tacagtatta 1200 atggaaataa cgcctatcat atctaaatac ttgaatactt gatatctaaa tactcttaag 1260 aaaagaccag tctgaggccg taaggtcgtc cagaccttga agttgagaaa acacttgtga 1320 atccccaatg ccttccggat gttgtggttg aaccgtatct ggagtgtgat gatgtcgtgg 1380 ttcatgttcc ctggtctctt gtcgtggttg gtgatttcga aatagagggg atttgttatg 1440 tcccaggtaa aaacgccatt ccttgcttga ggcgcagtga tgagttcccc tgtgcgagaa 1500 tccatggttg atgcagtcga tatggagata gaacgagcag ccgcattcga ggtctacccg 1560 cctacgtctg acggcccggg tcttcgctat gcggtgttgg actttgatgg gcacttgaga 1620 acaatggctc gtggatggtg atgaaggtgg cattctttaa agcccaggct ctaagggact 1680 ggttcttttc ctcgtccaga aactctttat atgatgatgt tggtcctgga ttgcagagga 1740 agatagtggg aatgccgcct ttaatttgaa ttggctttcc gtacttggta ttgctttgcc 1800 agtctctttg ggcccccatg aattctttga agtgtttgag gtagtggggg tcgacgtcat 1860 caatgacgtt gtaccaggcg tcgttgctgt agacctttgg actaaggtcc aggtgtccac 1920 acaggtaatt gtgtggtccc agagagcggg cccacattgt tttcccggtc cggctatcac 1980 cttctagaac aatactgatc ggtctccatg gccgcgcagc gggactgcat atattttcgg 2040 atacccacac ctctatgtct tctggcactt gtgtaaaaga ggatgataag aacggactaa 2100 cgtaagtttg tggcggagcc tggaagattc tatctgcgtt agcagatatg ttatggaact 2160 gtaaaaaaaa ggattttgga tctttttctt taatgatttg aagagcttct gatttagaag 2220 aagcattcaa cgcctctgca tatacctgtg ctaaatgttg gccctccccc cttgcacttc 2280 tggcatcgac ttggaaaatt ccatcgtcaa gaaattcccc tcccttttca atgtaagctt 2340 tgacatcgga cgatgattta gcgccctgaa tgttcggatg gaaatgtgtt gatcgggatg 2400 gggaaatgag atcgaagaat ctcgggttgg tacattggaa cttgccttcg aattggatga 2460 gaacatggag atgaggcacc ccatcctgat gtagttctct gcaaacccta atgaatttga 2520 tattcgtcgg gtacgaaagg gcttgtaatt gggaaagggc ctcttccttt gttaatgagc 2580 atcggggata ggttatgaaa taatttttgg catttatttg aaaacgaccg gctctcggca 2640 tatttgctgt cgttttggat cgggggacac tcaaaactcc aggggaacgg tggaatgggg 2700 ggcattatat aggatgtccc ccaatggcat atgtgtaaat aggtaaactt ccattcaaaa 2760 tttgaattgc gaatattggc ggccatccga ttaatatt 2798 //