ID AJ717557; SV 1; circular; genomic DNA; STD; VRL; 2799 BP. XX AC AJ717557; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus segment DNA A, complete sequence, isolate DE EACMV-[K24] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2799 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; dda96e90825fa303adbd4ada1a0e0117. XX FH Key Location/Qualifiers FH FT source 1..2799 FT /organism="East African cassava mosaic virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-[K24]" FT /mol_type="genomic DNA" FT /country="Kenya:Machakos, Katumani" FT /clone="K24AFA-10[2001]" FT /db_xref="taxon:62079" FT CDS 172..528 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8N5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8N5" FT /protein_id="CAJ78184.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 332..1105 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8N4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8N4" FT /protein_id="CAJ78185.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENVKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKKFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHAANPVYATLKIRIYFYDAVTN" FT CDS complement(1102..1506) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8N3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8N3" FT /protein_id="CAJ78186.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFEITNHDKRPGNMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRYQVLTYLDMIGVISINT FT VLQAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1247..1654) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8N2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8N2" FT /protein_id="CAJ78187.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRALRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQAAREHEPRHHHTPDTVQPQ FT PPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1563..2642) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8N1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8N1" FT /protein_id="CAJ78188.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLPKEEALSQLKAFSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEEIEVWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLEEEKNQSLKAWALKNATFVTLYEPL FT FSSANQSPTPHSEDQGTQT" FT CDS complement(2252..2485) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8N0" FT /protein_id="CAJ78189.1" FT /translation="MGCLISMFSSNSKASSNVPTPDSSISFPHPDQHISIRTFRELNHR FT PMSRLTLKREGNFLTMEFSKSMPEVPGGRANI" XX SQ Sequence 2799 BP; 729 A; 552 C; 731 G; 787 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacaa tggacgcgcc cgtgaaagaa 60 agtggtccct gcgcactggt tttggtcggc cagtcatatt cacgcgtgaa agtctagata 120 tttgttgtgt gtctttatag acttcgtcgc gaagtagtgg agcgtgtcaa catgtgggat 180 ccattgttga acgattttcc cgaaaccgtt cacggtttcc gttctatgct tgctgttaaa 240 tacctgttac atctggaaca ggaatacgat cgcggtactg tcggggctga gtatatacgg 300 gatctaatag gggttctacg gtgtaagagt tatgtcgaag cgaccaggag atataataat 360 ctcaacaccc gtatccaagg tgcggaggag gctgaacttc gacagcccat acacgaaccg 420 tgttgttgcc cccactgtcc gcgtcaccag aagcaaaata tgggccaaca ggcccatgta 480 tcggaagccc aagatgtaca gaatgtatcg aagcccagat gtccctaagg gctgtgaagg 540 cccatgtaag gttcagtcct atgaacagag ggatgatgtt aagcacactg gtatggtccg 600 atgtgtcagt gatgttacgc gtgggtcagg cattacccat agagtcggga agaggttttg 660 tgttaagtcc atatatatat tgggcaagat ctggatggat gagaatgtca agaagcaaaa 720 tcacacgaac catgtgatgt tcttcctcgt gcgagataga aggccgtatg gtccgagtcc 780 gcaagatttt gggcaagtgt tcaacatgtt tgataatgaa ccaactactg caactgtgaa 840 gaatgatctt agggatcggt atcaggtgtt acgtaaattc tatgcgactg tggttggtgg 900 accctctggg atgaaggaac aagctctggt taagaagttt tttaggatca ataatcatgt 960 agtgtataat catcaggaac aggccaagta tgagaatcat actgagaatg cgttgttatt 1020 gtatatggca tgtacacatg ccgcgaatcc tgtgtacgct acgctgaaaa tacgcatcta 1080 tttttatgat gcagtgacaa attaataaag gttgaatttt attgcatgtt gctccgtaac 1140 ttggagagtg tttagtaata catcgtacag aacatgatca acagcttgaa gtacagtgtt 1200 aatggaaata acgcctatca tatctaaata cgtgagcact tgatatctaa atactcttaa 1260 gaaaagacca gtctgaggcc gtaaggtcgt ccagaccttg aagttgagaa aacacttgtg 1320 aatccccaat gccttccgga ggttgtggtt gaaccgtatc tggagtgtga tgatgtcgtg 1380 gttcatgttc cctggccgct tgtcgtggtt ggtgatttcg aaatagaggg gatttgttat 1440 ttcccaggta aaaacgccat tctttgcttg aggcgcagtg atgagttccc ctgtgcgaga 1500 atccatggtt gatgcagtcg atatggagat agaacgagca gccgcattcg aggtccaccc 1560 gcctacgtct gagtgccctg gtcttcgctg tgcggtgttg gactttgatt ggcacttgag 1620 aacaatggct cgtagagggt gacgaaggtg gcattcttta aagcccaggc tttaagggac 1680 tgattctttt cctcttctag aaactcttta tatgatgaag ttggtcctgg attgcagagg 1740 aagatagtgg gaatgccgcc tttaatctga attggcttcc cgtactttgt attgctttgc 1800 cagtcccttt gggcccccat gaattctttg aagtgtttga ggtagtgggg gtcgacgtca 1860 tcaatgacgt tgtaccaggc gtcgtttgaa tatatctttg gagacagatc caggtgtcca 1920 cataaataat tatgtgggcc cagagaacga gcccacatgg tcttcccggt tcggctatca 1980 ccttctagaa caatactgat cggtctccat ggccgcgcag cgggactgca tatattttcg 2040 gatacccata cttcgatttc ctctgggact tgtgtaaatg aggaggataa gaacggacta 2100 acgtaggttt ggggcggagc ctggaagatt ctatctgcgt tagcagatat gttatgaaac 2160 tgtaaaaaaa aggactttgg atctttttcc ttgataattt gaagagcttc tgatttagac 2220 gaagcattca acgcttctgc atatacctga gctaaatgtt ggccctcccc cctggcactt 2280 ctggcatcga cttggaaaat tccatcgtca agaaattccc ctcccttttc aatgtaagcc 2340 ttgacatcgg acgatgattt agctccctga atgttcggat ggaaatgtgt tgatctggat 2400 ggggaaatga gatcgaagaa tctggggttg gtacattgga acttgccttc gaattggatg 2460 agaacatgga gatgaggcac cccatcctga tgtagttctc tgcaaaccct aatgaatttt 2520 atattcgtcg ggtaagaaaa ggcttttaat tgggaaaggg cctcttcctt tggtagcgag 2580 catcggggat aggttatgaa ataatttttg gcatttattt gaaaacgacc ggctcttggc 2640 atatttgctg tcgttttgga tcgggggaca ctcaaaactc caggggaacg gtggaatggg 2700 gggcattata taggatgtcc cccaatggca tatgtgtaaa taggtagatg tccattcaaa 2760 atttgaattg cgaatatggg cggccatccg attaatatt 2799 //