ID AJ717556; SV 1; circular; genomic DNA; STD; VRL; 2801 BP. XX AC AJ717556; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus segment DNA A, complete sequence, isolate DE EACMV-[K322] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2801 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; eeec5be51a6c82b74ccbb12fe9ed13de. XX FH Key Location/Qualifiers FH FT source 1..2801 FT /organism="East African cassava mosaic virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-[K322]" FT /mol_type="genomic DNA" FT /country="Kenya:Kitui, Township" FT /clone="K322FA-3[2002]" FT /db_xref="taxon:62079" FT CDS 174..530 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8P1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8P1" FT /protein_id="CAJ78178.1" FT /translation="MWDPLLNDFLETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCGCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8P0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8P0" FT /protein_id="CAJ78179.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVAAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8N9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8N9" FT /protein_id="CAJ78180.1" FT /translation="MDSRTGELITARQAKNGVFTWEITNPLYFDITNHDKRPGNMNHDI FT ITLQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRYQVLKYLHMIGVISINT FT VLKAVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8N8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8N8" FT /protein_id="CAJ78181.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRHHQPRQETREHEPRHHHTPDTIQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8N7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8N7" FT /protein_id="CAJ78182.1" FT /translation="MPRAGRFQINARNYFITYPRCSLTKEEALSQLKAFSYPTNLKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGDFLDDGIFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVTEEIEVWVSDNICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIHIKGGIPTIFLCNPGPTSSYKEFLDEDKNRSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSEDQGRQT" FT CDS complement(2254..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8N6" FT /protein_id="CAJ78183.1" FT /translation="MGCLISMFSSNSKASSNVPTPDSSISFPHPDQHISIRTFRELNHR FT PMSRLTLKREGTFLTMAFSKSMPGVPGGRASI" XX SQ Sequence 2801 BP; 730 A; 554 C; 727 G; 790 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacaa tatgaccgcg tccgttaaag 60 aaagtggtcc ccgtgcactt gttttggtcg gccagtcata ttcacgcgtg aaagtctaga 120 tatttgtggt ttgtctttat agacgtcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt gaacgatttt ctcgaaaccg ttcacggttt ccgttctatg cttgccgtta 240 aatacctgtt acatctggaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gtgatctaat aggggttcta cggtgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgtggctg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtccctaa gggctgtgaa 540 ggcccatgta aggttcagtc ctatgaacag agggatgatg ttaagcacac tggtatggtc 600 cgatgcgtca gtgatgttac ccgtggatca ggcattaccc atagagtcgg gaagaggttt 660 tgtgtgaaat ccatatatat attgggcaag atttggatgg atgaaaatat caagaagcaa 720 aatcatacaa accatgttat gttcttcctt gttcgagata gaaggcctta tggtccgagt 780 ccgcaagatt ttggacaagt gttcaacatg ttcgataatg aacctacgac ggcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 gggccctctg ggatgaagga acaagcgctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaacc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcgaat cctgtgtacg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagtg tgtttagtaa tacatcgtac agaacatgat caacagcttt gagtacagtg 1200 ttaatggaaa taacgcctat catatgtaaa tacttgagca cttgatatct aaatactctt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaatcgta tctggagtgt gatgatgtcg 1380 tggttcatgt tccctggtct cttgtcgtgg ttggtgatgt cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc attctttgct tgacgcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgacggccc tggtcttcgc tgtgcggtgt tggactttga tgggcacttg 1620 agaacaatgg ctcgtggagg gtgatgaagg tggcattctt taaagcccag gctttaaggg 1680 accggttctt gtcctcgtcc agaaactctt tataggatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaatat gaattggttt cccgtacttt gtattgcttt 1800 gccagtccct ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgtttg aatatatctt tggagacaga tccaggtgtc 1920 cacataaata attatgtggg cccagtgaac gagcccacat tgtcttcccg gttcggctat 1980 caccttctag aacaatactg atcggtctcc atggccgcgc agcgggactg catatattgt 2040 cggataccca gacttctatt tcctcggtga cttgtgtaaa tgaggatgat aagaacggac 2100 taacgtaagt ttggggcgga gcctggaaga ttctatctgc gttagcagat atgttatgga 2160 actgtaaaaa aaaggacttg ggatcttttt ctttgataat ttgaagagct tctgatttag 2220 aagaagcatt caacgcgtct gcatatacct gagctaaatg ctggccctcc cccctggcac 2280 tcctggcatc gacttggaaa atgccatcgt caagaaagtc ccctcccttt tcaatgtaag 2340 ccttgacatc ggacgatgat ttagctccct gaatgttcgg atggaaatgt gttgatctgg 2400 atggggaaat gagatcgaag aatctggggt tggtacattg gaacttgcct tcgaattgga 2460 tgagaacatg gagatgaggc accccatcct gatgtagttc tctgcaaacc ctaatgaatt 2520 tgagatttgt cgggtaagaa aaggctttca attgggaaag ggcctcttcc tttgttaatg 2580 agcatcgggg atatgtgatg aaataatttc tggcatttat ttgaaaacga ccggctcttg 2640 gcatatttgc tgtcgttttg gatcggggga cactcaaaac tccaggggaa cggtggaatg 2700 gggggcatta tataggatgt cccccaatgg catatgtgta aataggtaga tttccattca 2760 aaatttgaat tgcgaatatt tgcggccatc cgattaatat t 2801 //