ID AJ717555; SV 1; circular; genomic DNA; STD; VRL; 2800 BP. XX AC AJ717555; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-KE2 segment DNA A, complete sequence, DE isolate EACMV-KE2[K197] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic virus-KE2 OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2800 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 425ac1f0b320f65065a5817647d863da. XX FH Key Location/Qualifiers FH FT source 1..2800 FT /organism="East African cassava mosaic virus-KE2" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-KE2[K197]" FT /mol_type="genomic DNA" FT /country="Kenya:Kwale, Msambweni/Kitsumbani" FT /clone="K197FA-1[2002]" FT /db_xref="taxon:374778" FT CDS 174..539 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8P6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8P6" FT /protein_id="CAJ78172.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYERGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCPEGL" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8P5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8P5" FT /protein_id="CAJ78173.1" FT /translation="MSKRPGDIIISTPVSKVRKRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8P4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8P4" FT /protein_id="CAJ78174.1" FT /translation="MDSRTGELITAPQATNGVFTWEITNPLYFAITNHDKRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRSQVLKYLDMIGVISINT FT VLQSVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8P3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8P3" FT /protein_id="CAJ78175.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAIRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSNEWRFYLGNNKSPLFRNHQPRQEAREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2643) FT /pseudo FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT CDS complement(2253..2486) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8P2" FT /protein_id="CAJ78177.1" FT /translation="MGCLISMFSSNSKASSSVPLPDSSISFPHPDQHISIRTFRELNHR FT PMSKLTLKREGNFLTMEFSKSMSEVPGGRVSI" XX SQ Sequence 2800 BP; 734 A; 553 C; 727 G; 786 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccatca gatggccgcg cccgtgaagg 60 aaagtggtcc ccgcgcacgt gtttgggtcg gccaattata ttcacgcgtc aaagtctaga 120 tatttgtggt gtgtctttat agacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt gaatgatttt cccgaaaccg ttcacggttt ccgttctatg cttgctgtta 240 aatacctgtt acatttggaa caggaatacg agcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cgttgtaaga gttatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggaag aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtcccgaa gggctgtgaa 540 ggcccatgta aggttcagtc ctatgaacag agggatgatg tgaagcatac tggtatggtc 600 cgatgtgtca gtgatgttac tcgtgggtca ggcatcaccc atagagtggg gaagaggttt 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aaccatacga accatgttat gtttttcctc gttcgagata gaaggcctta tggtccgagc 780 ccacaagatt ttggacaagt gttcaacatg tttgataatg agcctactac ggcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagctctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtgtatg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac agaacatgat caacagattg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tatttgagca cttgagatct aaatactctt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggattgt gatgatgtcg 1380 tggttcatgt tccctggcct cttgtcgtgg ttggtgattg cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc attcgttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgatggccc tggtcttcgc tgtgcggtgt tggactttaa tgggcacttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaaggg 1680 actggttctt ttcctcatcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaatcggctt cccgtacttt gtattgcttt 1800 gccagtccct ttgggccccc atgaattctt tgaagtgttt gaggtagggg ggtcgacgtc 1860 atcaatgacg ttgtaccagg cgtcgttgga atatatcttt ggagacagat ccaggtgtcc 1920 acacaaataa ttatgtgggc ccagtgaacg agcccacatg gtcttcccgg ttcggctatc 1980 accttctaga acaatactga tcggtctcca tggccgcgca gcgggacggc atatattttc 2040 ggatacccat atttcgagtg cctctgggac ttgtgtaaat gaggatgata agaacggact 2100 aacgtaagtt tggggcggag cctggaagat tctatctgcg ttagcagata tgttatgaaa 2160 ctgtaaaaaa aaggactttg gatctttttc tttgataatc tgaagagctt cggacttaga 2220 agaagcattc aacgcttctg catatacctg agctaaatgc tgaccctccc ccctggcact 2280 tctgacatcg acttggaaaa ttccatcgtc aagaaattcc cctccctttt caatgtaagc 2340 tttgacatcg gacgatgatt tagctccctg aatgttcgga tggaaatgtg ttgatcggga 2400 tggggaaatg agatcgaaga atctgggagt ggtacactgg aacttgcctt cgaattggat 2460 gagaacatgg agatgaggca ccccatcctg atgttgttct ctgcaaaccc taatgaattt 2520 gatattcgtc gggtaagaaa atgcttttaa ttgggaaagg gcctcttcct ttgttaatga 2580 gcatcgggga taggtgatga aataattttt ggcatttatt tgaaaacgac cggctcttgg 2640 catatttgct gtcgttttgg atcggtggac actcaaaact ccagggaaac ggtggaatgg 2700 ggggcattat ataggatgtc ccccaatggc atatgtgtaa ataggtagag ctccattcaa 2760 aatttgaatt gcgaatattt gcggccatcc gattaatatt 2800 //