ID AJ717553; SV 1; circular; genomic DNA; STD; VRL; 2800 BP. XX AC AJ717553; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus segment DNA A, complete sequence, isolate DE EACMV-[K33] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2800 RA Bull S.E.; RT ; RL Submitted (19-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 7e67015ad16f98b9b718963b0ff9a086. XX FH Key Location/Qualifiers FH FT source 1..2800 FT /organism="East African cassava mosaic virus" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-[K33]" FT /mol_type="genomic DNA" FT /country="Kenya:Kwale, Shirachi" FT /clone="K33FA-64[2001]" FT /db_xref="taxon:62079" FT CDS 173..529 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8N5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8N5" FT /protein_id="CAJ78160.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKSYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCP" FT CDS 333..1106 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A8Q1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A8Q1" FT /protein_id="CAJ78161.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGPGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1103..1507) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8Q6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8Q6" FT /protein_id="CAJ78162.1" FT /translation="MDSRTGELITAPQAKNGVFTWEITNPLYFEITNHDKRPGHMNHDI FT ITLQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLKVFRYQVLKYLDMIGVISINT FT VLQAVDHVLYDVFLNTLQVTEQHTIKFNLY" FT CDS complement(1248..1655) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8Q5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8Q5" FT /protein_id="CAJ78163.1" FT /translation="MPPSSPSTSHYSQVPIKVQHRTAKTRALRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGNNKSPLFRNHQPRQEARAHEPRHHHTPDTVQPQ FT HPEGTGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1564..2643) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A8Q4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A8Q4" FT /protein_id="CAJ78164.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLKAFSYPTNIKFIR FT VCRELHQDGVPHLHILIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEEIKVWVSENICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEERNQSLKDWALKNATFVTLYEPL FT FSSAHQSPTPHSEDQGTQT" FT CDS complement(2253..2486) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8Q3" FT /protein_id="CAJ78165.1" FT /translation="MGCLISIFSSNSKASSNVPTPDSSISFPHPDQHISIRTFKELNHR FT PMSRLTLKREGNFLTMEFSKSMPEVPGGRASI" XX SQ Sequence 2800 BP; 733 A; 549 C; 723 G; 795 T; 0 other; accggatggc cgcgcccgaa aaagcatgtg gaccccatgg gatggccgcg cccgtgaaag 60 aaagtggtcc cgcgcactag tgttggtcgg ccagtcatat tcacgcgtga aagtctagat 120 atttgtggtt tgtctttata gacttcgtcg cgaagtagtt gagcgcgtca acatgtggga 180 tccattgttg aacgattttc ccgaaaccgt tcacggtttc cgttctatgc ttgctgttaa 240 atacctgtta catcttgaac aggaatacga tcgcggtact gtcggggctg agtatatacg 300 ggatctaata ggggttctac ggtgtaagag ttatgtcgaa gcgaccagga gatataataa 360 tctcaacacc cgtatccaag gtgcggagga ggctgaactt cgacagccca tacacgaacc 420 gtgttgttgc ccccactgtc cgcgtcacca gaagcaaaat atgggccaac aggcccatgt 480 atcggaagcc caagatgtac agaatgtatc gaagcccaga tgtccctaag ggctgtgaag 540 gcccatgtaa ggttcagtcc tatgaacaga gggatgatgt taagcacact ggtatggttc 600 gatgtgtcag tgatgttacc cgtgggccag gcattaccca tagagtcggg aagaggtttt 660 gtgtgaagtc catatatata ttgggcaaga tctggatgga tgagaatatt aagaagcaaa 720 atcatacgaa ccatgttatg ttcttcctgg ttcgagatag aaggccgtat gggccgagcc 780 ctcaagattt tggacaagtg ttcaacatgt ttgataatga acctactact gcaactgtga 840 agaatgatct tagggaccgg tatcaggtgt tacgtaaatt ctatgcgact gttgttggtg 900 gaccctctgg catgaaggaa caagcgctgg ttaagaggtt ttttaggatc aataatcatg 960 tagtatataa tcatcaggaa caggccaagt atgagaatca tactgagaat gcgttgttat 1020 tgtatatggc atgtacacat gcctcaaatc ctgtatacgc tacgctgaaa atacgcatct 1080 atttctatga tgcagtgaca aattaataaa ggttgaattt tattgtatgt tgctccgtaa 1140 cttggagtgt gtttagaaat acatcgtaca gaacatgatc aacagcttga agtacagtgt 1200 taatggaaat aacgcctatc atatctaaat acttgagcac ttgatatcta aatactttta 1260 agaaaagacc agtctgaggc cgtaaggtcg tccagacctt gaagttgaga aaacacttgt 1320 gaatccccag tgccttccgg atgttgtggt tgaaccgtat ctggagtgtg atgatgtcgt 1380 ggttcatgtg ccctggcctc ttgtcgtggt tggtgatttc gaaatagagg ggatttgtta 1440 tttcccaggt aaaaacgcca ttctttgctt gaggcgcagt gatgagttcc cctgtgcgag 1500 aatccatggt tgatgcagtc gatatggaga taaaacgagc agccgcattc gaggtctacc 1560 cgcctacgtc tgagtgccct ggtcttcgct gtgcggtgtt ggactttgat gggcacttga 1620 gaataatggc tcgtagaggg tgacgaaggt ggcattcttt aaagcccagt ctttaaggga 1680 ctgattcctt tcctcatcca gaaactcctt atatgatgat gttggtcctg gattgcagag 1740 gaagatagtg ggaatgccgc ctttaatttg aattggcttc ccgtacttgg tattgctttg 1800 ccagtctctc tgggccccca tgaattcttt gaagtgtttg aggtagtggg ggtcgacgtc 1860 atcaatgacg ttgtaccagg cgtcgttgga atatatcttt ggagacagat ccaggtgtcc 1920 acacaaataa ttatgtgggc ccagtgaacg agcccacatg gtcttcccgg ttcggctatc 1980 accttctaga acaatactga ttggtctcca tggccgcgca gcgggactgc atatattttc 2040 ggatacccat actttgatct cctctgggac ttgtgtaaag gaggatgata agaacggact 2100 aacgtaagtt tggggcggag cctggaagat tctatctgcg ttagcagata tgttatggaa 2160 ctgtaaaaaa aaggacttgg gatctttttc tttgataatt tgaagagctt ctgacttaga 2220 agaagcattc aacgcttctg catatacctg agctaaatgc tggccctccc ccctggcact 2280 tctggcatcg acttggaaaa ttccatcgtc aagaaattcc cctccctttt caatgtaagc 2340 cttgacatcg gacgatgatt tagctccttg aatgttcgga tggaaatgtg ttgatcggga 2400 tggggaaatg agatcgaaga atctggggtt ggtacattgg aacttgcctt cgaattggat 2460 gagaatatgg agatgaggca ccccatcctg atgtagttct ctgcaaaccc taatgaattt 2520 gatattcgtc gggtaagaaa aggcttttaa ttgtgaaagg gcctcttcct ttgttaatga 2580 gcatcgggga taggtgatga aataattttt ggcattgatt tgaaaacgac cggctcttgg 2640 catatttgct gtcgttttgg atcggtggac acacaaaact ccaggggaac ggtggaatgg 2700 ggggcattat ataggatgtc ccctaatggc atatgtgtaa ataggtagat ttccattcaa 2760 aatttgaatt gcgaatattg gcggccatcc gattaatatt 2800 //