ID AJ717537; SV 1; circular; genomic DNA; STD; VRL; 2801 BP. XX AC AJ717537; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-KE2 segment DNA A, complete sequence, DE isolate EACMV-KE2[K27] XX KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; AC1 protein; KW AC2 protein; AC3 protein; AC4 protein; AV1 protein; AV2 protein. XX OS East African cassava mosaic virus-KE2 OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus; OC East African cassava mosaic virus. XX RN [1] RP 1-2801 RA Bull S.E.; RT ; RL Submitted (18-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; d4997f5114cbef47a231d203c4773edb. XX FH Key Location/Qualifiers FH FT source 1..2801 FT /organism="East African cassava mosaic virus-KE2" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-KE2[K27]" FT /mol_type="genomic DNA" FT /country="Kenya:Kwale, Misakwakwani" FT /clone="K27FA-1[2001]" FT /db_xref="taxon:374778" FT CDS 174..539 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A8Y0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A8Y0" FT /protein_id="CAJ78064.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKNYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCPEGL" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A903" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A903" FT /protein_id="CAJ78065.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPRDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A8P4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A8P4" FT /protein_id="CAJ78066.1" FT /translation="MDSRTGELITAPQATNGVFTWEITNPLYFAITNHDKRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLRVFRSQVLKYLDMIGVISINT FT VLQSVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A8P3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A8P3" FT /protein_id="CAJ78067.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAIRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSNEWRFYLGNNKSPLFRNHQPRQEAREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A900" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A900" FT /protein_id="CAJ78068.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLKAFSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNLQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTNVPQELEVWVSENVMGSAARPWRPNSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFVTLHEPL FT FSSAHQSPTPHSEDQGHQT" FT CDS complement(2254..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8W9" FT /protein_id="CAJ78069.1" FT /translation="MGCLISMFSSNSKASSNVPTPDSSISFPHPDQHISIRTFRALNHR FT PMSRLTLKREGNFLTMEFSKSMPEVPGGRASI" XX SQ Sequence 2801 BP; 741 A; 556 C; 725 G; 779 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacaa catgcccgca ctcgtgaaag 60 aaagtggtcc ccgcgcactt gtattggtcg gccagtcata ttcacgcgtg gaagtctaga 120 tatttgtggg ttgacgttat atacttcgtc gcgaagtatt ggagcgcgtc aacatgtggg 180 atccattgtt gaacgatttt cccgaaaccg ttcacggttt ccgttctatg cttgctgtta 240 aatatctgtt acatctggaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga attatgtcga agcgaccagg agatataata 360 atctcaacac ccgtatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtcccgaa gggctgtgaa 540 ggcccatgta aggttcagtc ctatgaacag agggatgatg tgaagcatac tggtatggtc 600 cgatgtgtca gtgatgttac tcgtgggtca ggcatcaccc atagagttgg gaagaggttt 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aatcatacga accatgttat gttcttcctc gtacgagata gaaggcctta tggtccgagc 780 ccacgagatt ttggacaagt gttcaacatg tttgataatg agcctactac tgcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagctctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtgtatg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac aaaacatgat caacagattg aagtacagtg 1200 ttaatggaaa taacgcctat catatctaaa tacttgagca cttgagatct aaatactctt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggattgt gatgatgtcg 1380 tggttcatgt tccctggcct cttgtcgtgg ttggtgattg cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc attcgttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag caaccgcatt cgaggtctac 1560 ccgcctacgt ctgatggccc tggtcttcgc tgtgcggtgt tggactttga tgggcacttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaaggg 1680 actggttctt ttcctcatcc agaaactctt tatatgatga tgtgggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaatcggctt cccgtacttt gtattgcttt 1800 gccagtccct ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacataaata attatgtggt cccaatgacc tggcccacat ggtcttccct gtacgactat 1980 caccttctag aacaatactg ttgggtctcc aaggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaagt tcctgaggaa cgttagtaaa agaggatgat aagaacggac 2100 taacgtaagt ttggggcgga gcctggaaga ttcgatctgc gttagcagat atgttatgga 2160 actgtaaaaa aaaggacttg ggatcttttt ctttgataat ttgaagagct tctgatttag 2220 aagaagcatt caatgcgtct gcatatacct gagctaaatg ctggccctcc cccctggcac 2280 ttcgggcatc gacttggaaa attccatcgt caagaaattc ccctcccttt tcaatgtaag 2340 ccttgacatc ggacgatgat ttagcgccct gaaggttcgg atggaaatgt gttgatctgg 2400 atggggaaat gagatcgaag aatctggggt tggtacattg gaacttgcct tcgaattgga 2460 tgagaacatg gagatgaggc accccatcct gatgtagttc tctgcaaacc ctaatgaatt 2520 tgatatttgt cggataagaa aaagctttta attgggaaag ggcctcttcc tttgttaatg 2580 agcatcgggg ataggtgatg aaataatttt tggcatttat ttgaaaacga ccggctcttg 2640 gcatatttgc tgtcgttttg gatcggggga cactcaaaac tccaggagaa cggtggaatg 2700 gggggcatta tataggatgt cccccaatgg catatgtgta aataggtaga gttccattca 2760 aaatttgaat tgcgaatatt ggcggccatc cgattaatat t 2801 //