ID AJ717536; SV 1; circular; genomic DNA; STD; VRL; 2801 BP. XX AC AJ717536; XX DT 09-MAR-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-KE2 segment DNA A, complete sequence, DE isolate EACMV-KE2[K53] XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein. XX OS East African cassava mosaic virus-KE2 OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2801 RA Bull S.E.; RT ; RL Submitted (18-MAY-2004) to the INSDC. RL Bull S.E., Department of Disease & Stress Biology, John Innes Centre, RL Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 59980497830d3a5f8b04b1c1a026b747. XX FH Key Location/Qualifiers FH FT source 1..2801 FT /organism="East African cassava mosaic virus-KE2" FT /segment="DNA A" FT /host="Manihot esculenta" FT /isolate="EACMV-KE2[K53]" FT /mol_type="genomic DNA" FT /country="Kenya:Kwale, Kinyumbini" FT /clone="K53FA-1[2001]" FT /db_xref="taxon:374778" FT CDS 174..539 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q2A910" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q2A910" FT /protein_id="CAJ78058.1" FT /translation="MWDPLLNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKNYVEATRRYNNLNTLIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT EAQDVQNVSKPRCPEGL" FT CDS 334..1107 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:Q2A909" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2A909" FT /protein_id="CAJ78059.1" FT /translation="MSKRPGDIIISTPLSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGMVRCVSDVTRGSGITHR FT VGKRFCVKSIYILGKIWMDENIKKQNHTNHVIFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDLRDRYQVLRKFYATVVGGPSGMKEQALVKRFFRINNHVVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1104..1508) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q2A908" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2A908" FT /protein_id="CAJ78060.1" FT /translation="MDSRTGELITAPQATNGVFTWEITNPLYFAITNHDKRPGNMNHDI FT ITIQIRFNHNIRKALGIHKCFLNFKVWTTLRPQTGLFLKVFRSQVLKYLDMLGVISINT FT VLQSVDHVLYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1249..1656) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q2A907" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2A907" FT /protein_id="CAJ78061.1" FT /translation="MPPSSPSTSHCSQVPIKVQHRTAKTRAIRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSNEWRFYLGNNKSPLFRNHQPRQAAREHEPRHHHNPDTVQPQ FT HPEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1565..2644) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:Q2A906" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2A906" FT /protein_id="CAJ78062.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLKAFSYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTNVPEELEVWVSENVMGSAARPWRPNSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEKKNQSLKAWALKNATFVTLHEPL FT FSSAHQSPTPHSEDQGHQT" FT CDS complement(2254..2487) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2A8W9" FT /protein_id="CAJ78063.1" FT /translation="MGCLISMFSSNSKASSNVPTPDSSISFPHPDQHISIRTFRALNHR FT PMSRLTLKREGNFLTMEFSKSMPEVPGGRASI" XX SQ Sequence 2801 BP; 741 A; 557 C; 725 G; 778 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccacca catggccaca cgcgtaaaag 60 aaagtggtcc ccgcgcactt gtattggtcg gccagtcata ttcacgcgtg gaagtctaga 120 tatttgtggg ttgacgttat atacttcgtc gcgaagtagt ggagcgcgtc aacatgtggg 180 atccattgtt gaacgatttt cccgaaaccg ttcacggttt ccgttctatg cttgctgtta 240 aatacctgtt acatctggaa caggaatacg atcgcggtac tgtcggggct gagtatatac 300 gggatctaat aggggttcta cggtgtaaga attatgtcga agcgaccagg agatataata 360 atctcaacac ccttatccaa ggtgcggagg aggctgaact tcgacagccc atacacgaac 420 cgtgttgttg cccccactgt ccgcgtcacc agaagcaaaa tatgggccaa caggcccatg 480 tatcggaagc ccaagatgta cagaatgtat cgaagcccag atgtcccgaa gggctgtgaa 540 ggcccatgta aggttcagtc ctatgaacag agggatgatg tgaagcatac tggtatggtc 600 cgatgtgtca gtgatgttac gcgtgggtca ggcatcaccc atagagttgg gaagaggttt 660 tgtgtgaagt ccatatatat attgggcaag atctggatgg atgagaatat caagaagcaa 720 aatcatacga accatgttat tttcttcctc gtgcgagata gaaggcctta tggtccgagc 780 ccacaagatt ttggacaagt gttcaacatg tttgataatg agcctactac tgcaactgtg 840 aagaatgatc ttagggaccg gtatcaggtg ttacgtaaat tctatgcgac tgttgttggt 900 ggaccctctg ggatgaagga acaagctctg gttaagaggt tttttaggat caataatcat 960 gtagtgtata atcatcagga acaggccaag tatgagaatc atactgagaa tgcgttgtta 1020 ttgtatatgg catgtacaca tgcctcaaat cctgtttatg ctacgctgaa aatacgcatc 1080 tatttctatg atgcagtgac aaattaataa aggttgaatt ttattgcatg ttgctccgta 1140 acttggagcg tgtttagtaa tacatcgtac agaacatgat caacagattg aagtacagtg 1200 ttaatggaaa taacgcctaa catatctaaa tacttgagca cttgagatct aaatactttt 1260 aagaaaagac cagtctgagg ccgtaaggtc gtccagacct tgaagttgag aaaacacttg 1320 tgaatcccca atgccttccg gatgttgtgg ttgaaccgta tctggattgt gatgatgtcg 1380 tggttcatgt tccctggccg cttgtcgtgg ttggtgattg cgaaatagag gggatttgtt 1440 atttcccagg taaaaacgcc attcgttgct tgaggcgcag tgatgagttc ccctgtgcga 1500 gaatccatgg ttgatgcagt cgatatggag atagaacgag cagccgcatt cgaggtctac 1560 ccgcctacgt ctgatggccc tggtcttcgc tgtgcggtgt tggactttga tgggcacttg 1620 agaacaatgg ctcgtggagg gtgacgaagg tggcattctt taaagcccag gctttaaggg 1680 actggttctt tttctcatcc agaaactctt tatatgatga tgttggtcct ggattgcaga 1740 ggaagatagt gggaatgccg cctttaattt gaatcggctt cccgtatttt gtattgcttt 1800 gccagtccct ttgggccccc atgaattctt tgaagtgttt gaggtagtgg gggtcgacgt 1860 catcaatgac gttgtaccag gcgtcgttgc tgtagacctt tggactgaga tccaggtgtc 1920 cacataaata attatgtggt cccaatgacc tggcccacat ggtcttccct gtacgactat 1980 caccttctag aacaatactg ttgggtctcc aaggccgcgc agcggaaccc atcacgttct 2040 cggaaaccca gacttcaagt tcctcaggaa cgttagtaaa agaggatgat aagaacggac 2100 taacgtaagt ttggggcgga gcctggaaga ttcgatctgc gttagcagat atgttatgga 2160 actgtaaaaa aaaggacttg ggatcttttt ctttgataat ttgaagagct tctgatttag 2220 aagaagcatt caacgcgtct gcatatacct gagctaaatg ctggccctcc cccctggcac 2280 ttcgggcatc gacttggaaa attccatcgt caagaaattc ccctcccttt tcaatgtaag 2340 ccttgacatc ggacgatgat ttagcgccct gaatgttcgg atggaaatgt gttgatctgg 2400 atggggaaat gagatcgaag aatctggggt tggtacattg gaacttgcct tcgaattgga 2460 tgagaacatg gagatgaggc accccatcct gatgtagttc tcggcaaacc ctaatgaatt 2520 tgatattcgt cggataagaa aaagctttta attgggaaag ggcctcttcc tttgttaatg 2580 agcatcgggg ataggtgatg aaataatttt tggcatttat ttgaaaacga ccggctcttg 2640 gcatatttgc tgtcgttttg gatcggggga cactcaaaac tccagggaaa cggtggaatg 2700 gggggcatta tataggatgt cccccaatgg catatgtgta aataggtaga gttccattca 2760 aaatttgaat tgcgaatatt ggcggccatc cgattaatat t 2801 //