ID AJ704974; SV 1; circular; genomic DNA; STD; VRL; 2752 BP. XX AC AJ704974; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-Uganda variant segment DNA B, complete DE sequence, isolate EACMV-UG[K72] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus (Uganda variant) OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2752 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; ee6bf3f60b117b2b775949a6b1369ff8. XX FH Key Location/Qualifiers FH FT source 1..2752 FT /organism="East African cassava mosaic virus (Uganda FT variant)" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-UG[K72]" FT /mol_type="genomic DNA" FT /country="Kenya:Busia, Mandende" FT /clone="K72FB-45[2002]" FT /db_xref="taxon:375009" FT CDS 325..1125 FT /transl_table=1 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /note="The BC1 open-reading frame has a naturally occurring FT frameshift mutation." FT /db_xref="GOA:A4CYP2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A4CYP2" FT /protein_id="CAG29109.1" FT /translation="MSPVRQCKMYSVYRRGYKTPYRSPYGARGTPYVNRKTSGKQTAKS FT RVSRKLAYESPKGLYTRRSLEDIHNGAALKLPQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLNLRVSGTVNVSQSGGDDNMGERTTMRGIFFMACLVDEKPFVPDGVSILPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLSRTTCDVYSQFVLNYVG" XX SQ Sequence 2752 BP; 764 A; 463 C; 748 G; 777 T; 0 other; accggatggc cgcgcccgaa aagcagatgg accccacaat ggcccccacg cactaagaaa 60 cgtcagccaa ccatgtgcaa gactgggaga ctcggtattt acgcatggag gattaagtgg 120 gccctacgta ctaagtttga caggcaattt tattgcgatg tgtgtatcat attttataag 180 tctgttacgg gccaatctaa agttatgtta tggggtctat cataaaaaag caaaatatag 240 gttcctattt acatatggat tatagtttta tgtgcgcgta tatgatccgc cacgtgttat 300 taatgtgtcc tataaatatg gtacatgtct cccgttcgtc aatgcaagat gtattcggta 360 tacagacgtg ggtataagac gccgtatagg agtccgtatg gcgctcgtgg aacaccatat 420 gtgaatcgta agacctctgg taaacagacg gctaaatctc gtgtatcgcg aaagttggcg 480 tatgaatcgc caaaaggtct atatacgcga cgctcattgg aggatatcca taatggggct 540 gccttgaagt tgccgcaaca gggggattat acgtcctacg tgacactccc atgtcgaggc 600 atcgatggta atgggggtag gtctgtggat catataaaat tattaaattt gagggtttct 660 gggaccgtca acgtcagtca atccggtggt gatgacaata tgggagagag aacgaccatg 720 aggggtattt ttttcatggc gtgtcttgtt gatgagaaac ccttcgttcc agatggggtc 780 agcatattgc cgacgtttaa tgagttgttc ggggaatatg aatccgttta tggcatgcct 840 aggttgaagg aaaacgtccg tcaccgttat cgcgttattg ggacgtcgaa attatatata 900 acgaccgatg aagatcacat ccagaagcct tttagtctac gtcgaagact aagtggaggg 960 aaatatccta tatggtcgtc gttcaaggat gtggataata gtagtacagg tggtaactat 1020 aaaaatataa ataagaacgc tatactcgtt agttatgtgt gggtgtcgct aagtcggacc 1080 acgtgtgatg tgtattcgca gtttgtactt aattacgtcg gctgataata aaactatata 1140 agtgtttgat ggacattaat tatgagggaa cgaacgaaaa agagatgaac atgaatggta 1200 agcatataga gttttattat gttccgaagc aaatatggta catataaatg gttcattaca 1260 atggccttgg tgcttcggat ttgatcttga tgaggcactt gttgatggta ctctcaagca 1320 gtgtctcgag gtcctttctg gatactgagt cggattgggc ctgtgatacc gagtcccctg 1380 ggtctaactc tggtgtgtgt aatctgtgta gtctctggta aggatagtct gtggagtcgt 1440 tgtctaagtc tgttggtatt gtcgatgggt ccattctcat ggactgtgaa cgaaagtgtt 1500 ccagccttgt tgggcctgat gagctgggta gcccaatctg agacttagtg gcccatgttt 1560 ctccaggtag gatggtgatg ggcctgtggg ctatgggtcg tggactatga gcatgtggag 1620 ttggatttag taatctccgt cttgtttctc ctttttccac agaccaaaag tctatgcagt 1680 ctttcgtgta tcccttggat aagatgttaa ttgttggggg tttgaaacgt atgtctgtgg 1740 aatgtttggc cgatgataat cggagcttgg ctttgatgga tgcgaatttc acgccttcta 1800 cgacgttgga gtcctcgact cggtacatta ttttccaagg ggaggggtcc gaaatcgaaa 1860 aatatgtaga agagaagtag tggaggtcga cgttgcaagc tattgggaaa gtgaatgctg 1920 cttgagctgc gtcttcaagg ctgacgcgat tgtctcggat ttctacgata accgacccag 1980 ttgcgttaaa tgggacctgg ttgcggtatt caattataat gtggtcgatt ttcatacatc 2040 ggcctttgag tcgcatggtc gcctgctcga agagctcgga aattggagat tgattggtgc 2100 agcatcgttg gttaaggcgt actcggtgcg tttgctgttt atgtaattat tgtctgtgac 2160 ggtgaattgg ttgtccattc taggaatgaa aaaaacaagg gttaggaaac ggagagaaga 2220 gatgtataaa aggcagaaca aggttgataa aatgtcttgt agacatggaa gcatatatgc 2280 agtgaatata tataagaaca cacgaaaata gagcaaggat catatatgtg taaccggccg 2340 cgcagcggat tggaattcag agaaatcgac gaacaaagaa taaagtcgaa tggggttatg 2400 tgattaaacc acttactgaa tcaccgagga agcagccgag agtgaattcc tgttccaagt 2460 tggagaaaac aaagaaagaa aagtagaacg tattgggaga aaaaggaaag agagtagatg 2520 ttatgcgtgg tgtcgttaaa tgatatgcca tggggtgttt atataggcgt taaaagccac 2580 acgtggtaga gagagaaaga agagagaggc gagagcattc gggggacact caaagtctct 2640 agcaattggg ggaacggggg tcaatttata tgatgtcccc taaatggcat ttatgtaata 2700 tcctcattaa agttgaagtt cagacgtgga aagcggccat ccgtataata tt 2752 //