ID AJ704962; SV 1; circular; genomic DNA; STD; VRL; 2776 BP. XX AC AJ704962; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-Uganda variant segment DNA B, complete DE sequence, isolate EACMV-UG[K90] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus (Uganda variant) OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2776 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; bad5d32f60c518530741a271fdcb4825. XX FH Key Location/Qualifiers FH FT source 1..2776 FT /organism="East African cassava mosaic virus (Uganda FT variant)" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-UG[K90]" FT /mol_type="genomic DNA" FT /country="Kenya:Teso, Busia/Bugeni" FT /clone="K90FB-4[2002]" FT /db_xref="taxon:375009" FT CDS 358..1134 FT /transl_table=1 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:A4CYN6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A4CYN6" FT /protein_id="CAG29087.1" FT /translation="MYSGYRRGYKTPYRSPYGARVTPYVYRKTAVKQTSKSRVPRKLAY FT ESPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNISQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRSTCDVYSQFVLNYVG" FT CDS complement(1263..2369) FT /transl_table=1 FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:A4CYN7" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A4CYN7" FT /protein_id="CAG29088.1" FT /translation="MTSNPLRGQLYIYDPCSALVCYYRYPMHICFHVYKTFYKLALTFI FT RLFFPFTNPCFFFIHSMDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMR FT LKGRCMKIDHIIIEYRNQVPFNAIGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYF FT SSTYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILS FT KGYTKDCIDFWSVEKGETRRRLLNPTPHAHSQRPITHRPITILPGETWATKSQIGLPSS FT SGPARLDHFRSQSMRMDPSTTPTDLDNDSTEYPYQTLHRLHTPELDPGDSVSQTPSDSV FT SRKDLETLLESTINKCLIKIKSEAPRQL" XX SQ Sequence 2776 BP; 779 A; 445 C; 745 G; 807 T; 0 other; accggatggc cgcgcccgaa aaagcagggt gaccccacaa tggcccgcac gcactaagta 60 atgtcagcca atcatgttca agactggaag acgcggtagt tacgtattga tgagtaagtg 120 gtcccgacgc actaatgttg acaggcaatt ggattgctat gtgtgtatca tattcatata 180 ggtgtgttac gggttaatct aaagttaggt gatggggcct atcataaaaa cgcaatacat 240 aggtacgtat gtacatattg attatatttt tgtttgcgga tatatgagtt gccacgtgta 300 taatggataa ggaatgtcct ataaatattt ggcatgtctc tcgtccgtta atgcaagatg 360 tattctggtt acaggcgtgg gtataagact ccgtatagga gtccgtatgg cgctcgtgta 420 acaccatatg tttatcgtaa gactgctgtt aaacaaacgt ctaaatctcg tgtaccgcga 480 aagttggcgt atgaatcgcc aaaatgtcta tatacgcgac gctcattgga ggatatccat 540 aatggggctt ccttaaagtt gcctcaacag ggggattata cgtcctacgt gacactccca 600 tgtcgaggta tcgatggtaa tgggggtagg tctgttgatc atataaaatt attaagtttg 660 agggtgtctg ggaccgtcaa tatcagtcaa tgcggtggtg atgataatat gggagagaga 720 acgaccatga ggggtatttt tttcatggct tgtcttgttg ataagaaacc attcgttcca 780 gagggggtta gtatattgcc gacgtttaat gagttgttcg gggaatatga atccgtgtat 840 ggcatgccta ggttgaagga aaacgttcgt caccgttatc gcgtgattgg gacgtcgaaa 900 ttatatataa cgaccgatga agagcacatc cagaagccat ttagtctacg tcgaagacta 960 agtggaggga aatatcctat gtggtcgtcg ttcaaggatg tggataatag tagtacaggt 1020 gggaactata aaaatataaa taagaacgct atactagtta gttatgtgtg ggtatcgcta 1080 tgtcggtcca cgtgtgatgt gtattcccag tttgtactta attacgtcgg ttgataataa 1140 aacgagataa gtgtgttgac attaattatg tttgaactaa cgaaatatga gatgaacatc 1200 aatggaaagc acatatagtg ttaatatgta gcgaatcaaa tatcgtacat atcaagtgtt 1260 tattacaatt gcctgggtgc ttcggatttt attttgatga gacacttgtt tatggtactc 1320 tcaagcagtg tctcgaggtc ctttctggat actgagtcgg atggggtctg tgataccgag 1380 tcccctgggt ccaattcggg tgtgtgtaat ctgtgtagtg tctggtaagg atattctgtg 1440 gagtcgttgt ctaagtccgt tggtgttgtc gatgggtcca ttctcatgga ctgtgaacga 1500 aagtggtcca gccttgctgg gccggatgag ctgggtagcc caatctgaga cttcgtggcc 1560 catgtttctc cagggagaat ggtgatgggc ctgtgggtta tgggtcgttg actatgagca 1620 tgtggagttg gatttagtaa tcgccgtcgt gtttctcctt tttccacgga ccagaagtct 1680 atgcaatcct ttgtgtagcc cttggataat atgttaattg ttgggggttt gaaacgtatg 1740 tccgtggaat gtttggccga tgataatcgg agcttggcct tgatggatgc gaatttcacg 1800 ccttctatga cgtttgagtc ttcgactctg tacatgattc tccaagggga gggttcggaa 1860 atcgaaaaat atgtagacga gaagtagtgg aggtctacgt tgcaagctat tgggaaagtg 1920 aatgctgctt gagcagcgtc ttcaaggctg acgcgattgt ctctgatttc tacgataacc 1980 gacccaattg cgttaaatgg gacctggttt cggtattcaa ttataatgtg gtcgattttc 2040 atacatcggc ctttgagtcg catggtcgcc tgctcgaatg agctcggaaa ttggagattg 2100 attggtgcag catcgttggt taatgcgtac tctgtgcgtt tgctgttgat gtaattattg 2160 tctgtgacgg tgaattggtt gtccatacta tgaatgaaaa aaaaacaagg gttagtaaac 2220 ggaaagaaga gacgtataaa agtcagagca agtttataaa atgtcttgta tacatggaag 2280 catatatgca ttgggtatcg ataataacac actaaagcag aacaaggatc atatatgtat 2340 aattggccgc gcagcggatt ggaagtcata caaatcggcg aacaaataat aaatctaatg 2400 aggttagggg atggaaataa cttacggaag cacctaggaa gcagtcggga ttgaattctt 2460 gttataagtg gagaaaacaa agaaataaaa gttaacgaaa taaaagtatg acggattggt 2520 atagaaagga aagtgagcag atgatatgcg ccgtgtcgtt aaatgagatg ttattgggtg 2580 tttatatagg cgttaataag cgagacgtgg tagagagaga aagaagagag aggcgagagc 2640 aatcggggga cactcaaagt ctgtagcaat cgggggaaag gggggcaatt tatatgatgc 2700 cccctaaatg gcatttatgt aatatcctca ttgaatgtga aatgcaaacg tggaaagcgg 2760 ccatccgtat aatatt 2776 //