ID AJ704958; SV 1; circular; genomic DNA; STD; VRL; 2774 BP. XX AC AJ704958; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-Uganda variant segment DNA B, complete DE sequence, isolate EACMV-UG[K79] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus (Uganda variant) OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2774 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 2157256255ee71b7ee383cf57332a201. XX FH Key Location/Qualifiers FH FT source 1..2774 FT /organism="East African cassava mosaic virus (Uganda FT variant)" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-UG[K79]" FT /mol_type="genomic DNA" FT /country="Kenya:Bungoma, Nangeni" FT /clone="K79FB-13[2002]" FT /db_xref="taxon:375009" FT CDS 358..1134 FT /transl_table=1 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:A4CYM8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A4CYM8" FT /protein_id="CAG29079.1" FT /translation="MYSGYRRGYKTLYRSPYGARVTPYVYRKTAVKQTSKSRVPRKLAY FT ESPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNVGQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRSTCDVYSQFVLNYVG" FT CDS complement(1263..2186) FT /transl_table=1 FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:A4CYM9" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A4CYM9" FT /protein_id="CAG29080.1" FT /translation="MDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNAIGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPHAHSQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLDHFRSQSMRLDPSTTPTDLDNDSTEYPYQTLHRLHTPELDPGDSVSQAPSDSVSR FT KDLETLLESTINKCLIKIKSEAPRQL" XX SQ Sequence 2774 BP; 771 A; 453 C; 755 G; 795 T; 0 other; accggatggc cgcgcccgaa aaagcagggt gaccccacaa tggcccccac gcactaagta 60 atgtcagcca atcatgtcca agactggaag acgcggtagt tacgtattga tgagtaagtg 120 gtcccgacgc actaatgttg acaggcaatt ggattgctat gtgtgtatca tatttttata 180 ggtgtgttac tggttaatct aaagttaggt gatggggcct atcataaaaa cgcaatacat 240 aggtacgtat gtacatattg attatatttt tgtttgcgga tatatgatcc gccacgtgta 300 taatggatat ggaatgtcct ataaatagtt ggtatgtctc ccgtccgtta atgcaagatg 360 tattctggtt acaggcgtgg gtataagact ctgtatagga gtccgtatgg cgcccgtgta 420 acaccatatg tttatcgtaa gactgctgtt aaacagacgt ctaaatctcg tgtaccgcga 480 aagttggcgt atgaatcgcc aaaatgtcta tatacgcgac gctcattgga ggatatccat 540 aatggggctt ccttaaagtt gcctcaacag ggggattata cgtcctacgt gacactccca 600 tgtcgaggta tcgatggtaa tgggggtagg tctgtcgatc atataaaatt attaagcttg 660 agggtgtctg ggaccgtcaa cgtcggtcaa tgcggtggtg atgataatat gggagagaga 720 acgaccatga ggggtatttt tttcatggct tgtcttgttg ataagaaacc tttcgttcca 780 gagggggtta gtatattgcc gacgtttaat gagttgttcg gggaatatga atccgtgtat 840 ggcatgccta ggttgaagga aaacgttcgt caccgttatc gcgtgattgg gacgtcgaaa 900 ttatatataa cgaccgatga agagcacatc cagaagccat ttagtctacg tcgaagacta 960 agtggaggga aatatcctat gtggtcgtcg ttcaaggatg tggataatag tagtacaggt 1020 gggaactata aaaatataaa taagaacgcc atactagtta gttatgtgtg ggtatcgcta 1080 tgtcggtcca cgtgtgatgt gtattcccag tttgtactta attacgtcgg ttgataataa 1140 aacgagaaaa gtgtgttgac attaattatg tttgaactaa cgaaatatga gatgaacatc 1200 aatggaaagc acatatagtg ttattatgta gcgaatcaaa tatcgtacat atcaagtgtg 1260 tattacaatt gcctgggtgc ttcggatttg attttgatga gacacttgtt tatggtactc 1320 tcaagcagtg tctcgaggtc ctttctggat actgagtcgg atggggcctg tgataccgag 1380 tccccggggt ccaattcggg tgtgtgtaat ctgtgtagtg tctggtaagg atattctgtg 1440 gagtcgttgt ctaagtccgt tggtgttgtc gatgggtcca atctcatgga ctgtgaacga 1500 aagtggtcca gccttgccgg gccggatgag ctgggtagcc caatctgaga cttcgtggcc 1560 catgtttctc cagggagaat ggtgatgggc ctgtgggtta tgggtcgttg actatgagca 1620 tgtggagttg gatttagtaa tctccgtcgt gtttctcctt tttccacgga ccagaagtct 1680 atgcaatcct ttgtgtagcc cttggataat atgttaattg ttgggggttt gaaacgtatg 1740 tccgtggaat gtttggccga tgataatcgg agcttggcct tgatggatgc gaatttcacg 1800 ccttctatga cgtttgagtc ttcgactctg tacatgattc tccaagggga gggttctgaa 1860 atcgaaaaat atgtagacga gaagtagtgg aggtctacgt tgcaagctat tgggaaagtg 1920 aatgctgcct gagcagcgtc ttcaaggctg acgcgattgt ctctgatttc tacgataacc 1980 gacccaattg cgttaaatgg gacctggttt cggtattcaa ttataatgtg gtcgattttc 2040 atacatcggc ctttgagtcg catggtcgcc tgctcgaatg agctcggaaa ttggagattg 2100 attggtgcag catcgttggt taatgcgtac tccgtgcgtt tgctgttgat gtaattattg 2160 tctgtgacgg tgaattggtt gtccattcta tgaatgaaaa aacaagggtt agtaaacgga 2220 gagaagagat gtataaaagt cagagcaagt gtataaaatg tcttgtatac atggaagcat 2280 atatgtattg ggtatcgata ataacacact aaagcagaac aaggatcata tatgtataat 2340 tggccgcgca gcggattgga agtcagacaa atcggcgaag aaataaaaaa gtcgaatgag 2400 gttatgggat ggaaacaact tacggaagca ccgatgaagc agtcgggatt gaattcttgt 2460 tataagtgga gaaaacaaag aaataaaagt taacgaaaga aaagtatgac ggattggtat 2520 agaaaggaaa gtgagcagat gatatgcgcc gtgtcgttaa atgagatgtt attgggtggt 2580 taaataggcg ttaataagcg agacgtggta gagagagaaa gaagagagag gcgagagcaa 2640 tcgggggaca ctcaaagtct gtagcaatcg ggggaaaggg gggcaattta tatgatgtcc 2700 cctaaatggc atttatgtaa tatcctcatt gaatgtgaaa ggcaaacgtg gaaagcggcc 2760 atccgtataa tatt 2774 //