ID AJ704957; SV 1; circular; genomic DNA; STD; VRL; 2759 BP. XX AC AJ704957; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-Uganda variant segment DNA B, complete DE sequence, isolate EACMV-UG[K140] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus (Uganda variant) OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2759 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; c14f7944c41673f1533549f4536e4eaa. XX FH Key Location/Qualifiers FH FT source 1..2759 FT /organism="East African cassava mosaic virus (Uganda FT variant)" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-UG[K140]" FT /mol_type="genomic DNA" FT /country="Kenya:Siaya, Ugunja/Ligega" FT /clone="K140FB-2[2002]" FT /db_xref="taxon:375009" FT CDS 357..1133 FT /transl_table=1 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:A4CYM6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A4CYM6" FT /protein_id="CAG29077.1" FT /translation="MYSGYRRGYKTPYRSPYGARVSPYVYRKTAVKQTSKSRVPRKLAY FT EPPKCLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNISQCGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEEHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRSTCDVYSQFVLNYVG" FT CDS complement(1262..2185) FT /transl_table=1 FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:A4CYM7" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A4CYM7" FT /protein_id="CAG29078.1" FT /translation="MDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNAIGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPHAHSQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLDHFRSQSMRMDPSTTQTDLDNDSTEYPYQTLHRLHTPELDPGDSVSQTPSDSVSR FT KDLETLLESTINKCLIKIKSEAPRQL" XX SQ Sequence 2759 BP; 765 A; 445 C; 747 G; 802 T; 0 other; accggatggc cgcgcccgaa aaagcagggt gaccccacaa tggcccccac gcacaaagta 60 atgtcagcca atcatgttca agactggaag acgcggtagt tatgattgat gagtaagtgg 120 tcccgacgca ctaatgttga caggcaattg gattgctatg tgtgtatcat attcatatag 180 gtgtgttact ggttaatcta aagttaggtg atggggccta tcataaaaac gcaatacata 240 ggtacgtatg tacatattga ttatattttt gtttgcggat atatgatccg ccacgtgtag 300 aatggatatg gaatgtccta taaatagttg gcatgtctcc cgtctgttaa tgcaagatgt 360 attctggtta caggcgtggg tataagactc cgtataggag tccgtatggc gctcgtgtat 420 caccatatgt gtatcgtaag actgctgtta aacagacgtc taaatctcgt gtaccgcgaa 480 agttggcgta tgaaccgcca aaatgtctat atacgcgacg ctcattggag gatatccata 540 atggggcttc cttaaagttg cctcaacagg gggattatac gtcctacgtg acactcccat 600 gtcgaggtat cgatggtaat gggggtaggt ctgttgatca tataaaatta ttaagtttga 660 gggtgtctgg gaccgtcaat atcagtcaat gcggtggtga tgataatatg ggagagagaa 720 cgaccatgag gggtattttt ttcatggctt gtcttgttga taagaaaccg ttcgttccag 780 agggggttag tatattgccg acgtttaatg agttgttcgg ggaatatgaa tccgtgtatg 840 gcatgcctag gttgaaggaa aacgttcgtc accgttatcg cgtgattggg acgtcgaaat 900 tatatataac gaccgatgaa gagcacatcc agaagccatt tagtctacgt cgaagactaa 960 gtggagggaa atatcctatg tggtcgtcgt tcaaggatgt ggataatagt agtacaggtg 1020 ggaactataa aaatataaat aagaacgcta tactagttag ttatgtgtgg gtatcgctat 1080 gtcggtccac gtgtgatgtg tattcccagt ttgtacttaa ttacgtcggt tgataataaa 1140 acgagataag tgtgttgaca gtaattatgt ttgaactaac gaaatatgag atgaacatca 1200 atggaaagca catatagtgt tattatgtag cgaatcaaat atcgtacata tcaagtgttt 1260 attacaattg cctgggtgct tcggatttta ttttgatgag acatttgttt atggtacttt 1320 caagcagtgt ctcgaggtcc tttctggata ctgagtcgga tggggtctgt gataccgagt 1380 cccctgggtc caattcgggt gtgtgtaatc tgtgtagtgt ctggtaagga tattctgtgg 1440 agtcgttatc taagtccgtt tgtgttgtcg atgggtccat tctcatggac tgtgaacgaa 1500 agtggtccag ccttgctggg ccggatgagc tgggtagccc aatctgagac ttcgtggccc 1560 atgtttctcc agggagaatg gtgatgggcc tgtgggttat gggtcgttga ctatgagcat 1620 gtggagttgg atttagtaat ctccgtcgtg tttctccttt ttccacggac cagaagtcta 1680 tgcaatcctt cgtgtagccc ttggataata tgttaattgt tgggggtttg aaacgtatgt 1740 ccgtggaatg tttggccgat gataatcgga gcttggcctt gatggatgcg aatttcacgc 1800 cttctatgac gtttgagtct tcgactctgt acatgattct ccaaggggag ggttctgaaa 1860 tcgaaaaata tgtagacgag aagtagtgga ggtctacgtt gcaagctatt gggaaagtga 1920 atgctgcttg agcagcgtct tcaaggctga cgcgattgtc tctgatttct acgataaccg 1980 acccaattgc gttaaatggg acctggtttc ggtattcaat tataatgtgg tcgattttca 2040 tacatcggcc tttgagtcgc atggtcgcct gctcgaatga gctcggaaat tggagattga 2100 ttggtgcagc atcgttggtt aatgcgtact ctgtgcgttt gctgttgatg taattattgt 2160 ctgtgacggt gaattggttg tccattctat gaatgaaaaa aacaagggtt agtaaacgga 2220 gagaagagat gtataaaagt cagagcaagt ttataaaatg tcttgtatac atggaagcat 2280 atatgcattg ggtatcgata ataacacact aaagcagaac aaggatcata tatgtataat 2340 tggccgcgca gcggattgga agtcagacaa atcggcgaac aaataaaaaa gtagaatgag 2400 ggtatgggat ggaaacaact tacggaagca cctaggaagc agtcgggatt gaatgcttgt 2460 tataagtgga gaaaacaaag aaataaaagt atgacggatt ggtatagaaa ggaaagtgag 2520 cagatgatat gcgccgtgtc gttaaatgag atgttattgg gtgtttatat aggcgttaat 2580 aagcgagacg tggtagagag agaaagaaga gagaggcgag agcaatcggg ggacactcaa 2640 agtctgtagc aatcggggga aaggggggca atttatatga tgccccctaa atggcattta 2700 tgtaatatcc tcattgaatg tgaaatgcaa acgtggaaag cggccatccg tataatatt 2759 //