ID AJ704955; SV 1; circular; genomic DNA; STD; VRL; 2755 BP. XX AC AJ704955; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus-Uganda variant segment DNA B, complete DE sequence, isolate EACMV-UG[K262] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus (Uganda variant) OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2755 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 5f665955d851b8301abfa62f0c541ec2. XX FH Key Location/Qualifiers FH FT source 1..2755 FT /organism="East African cassava mosaic virus (Uganda FT variant)" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-UG[K262]" FT /mol_type="genomic DNA" FT /country="Kenya:Migori, Ratienyi" FT /clone="K262FB-6[2002]" FT /db_xref="taxon:375009" FT CDS 350..1126 FT /transl_table=1 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:A4CYM3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:A4CYM3" FT /protein_id="CAG29074.1" FT /translation="MYSVYRRGYKTPYRSPYVARVTPYVYRKTAFKQTAKSRVSRKLAY FT ESPKVLYMRRSLEDIHNGASMKLPQQGGHTSYVTLPCRGVDGNGGRSVDHIKLLNLRVS FT GTVNVSQCGGDDNMGERTTMEGIFFMACLVDKKPFVPEGVSTLPTFKELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKDVDNSSTGG FT NYKNVNKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT CDS complement(1258..2181) FT /transl_table=1 FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:A4CYM4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:A4CYM4" FT /protein_id="CAG29075.1" FT /translation="MDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNATGSVIVEIKDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTNDCIDFWSVEKGETRRRLLNPTPTARCQRPISHRPITILPGETWATKSQIGLPSSSG FT PTRLEHFRSQSMRMDPSTTPTDFDNDSTEYPYQKLHRLHTPELDPGDSVSQAQSDSVSR FT KDLETLLESTINKCLIKIKSEAPRPL" XX SQ Sequence 2755 BP; 757 A; 457 C; 727 G; 814 T; 0 other; accggatggc cgcgcccgaa aaaagcaggt ggagcccaca atggccccta cgcactaagt 60 aatgtcagcc aatcatgttc aagaccggaa gactcagtag tgacgcatgg attattaagt 120 ggtccctacg cactaatgtt gaaaggcaat ttgatggcta tgtgtgtatc atagccttat 180 aggtgtgcta tgggccaatc gagagttagt tatggggcct atcataaaaa cgcaaaatat 240 atgtacgtat gtacatattg atgatattgt tatttgcgga tatatgatcc gccacgtgtt 300 tacaattgtc ctataaatat gttgtatgtc tcccgttctg taatgcaata tgtattctgt 360 ttacagacgt gggtataaga ctccatatag gagtccgtat gtcgctcgtg taacaccata 420 tgtttaccgt aaaaccgcgt ttaaacagac ggctaaatcg cgtgtatctc gaaagttggc 480 gtatgaatcg ccaaaagtat tatatatgcg acgctcattg gaggatatcc ataatggtgc 540 ttccatgaag ttgccgcaac aggggggtca tacgtcctac gtgacactcc cttgtcgtgg 600 tgtcgatggt aatgggggta ggtctgttga tcatataaaa ttattaaact tgagggtttc 660 tgggaccgtc aacgtcagtc aatgtggtgg tgatgacaat atgggagaga gaacgaccat 720 ggaaggtatc tttttcatgg cttgtcttgt tgacaagaaa cccttcgttc cagagggggt 780 cagcacattg ccgacgttca aggagttgtt tggtgaatat gaatccgtgt atggcatgcc 840 caggttaaag gaaaacgtcc gtcaccgtta tcgcgttatt gggacgtcga aattatatat 900 aacgaccgat gaagatcaca tccagaagcc gtttagtcta cgtcgaagac taagtggagg 960 gaaatatcct atttggtcgt ctttcaagga tgtggataat agtagtacag gtggtaacta 1020 taaaaatgtt aataagaacg ctatactcgt tagttatgtg tgggtttcgc tatgtcggac 1080 cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggttgataat aaaactatat 1140 aagtgtttgt gggacattaa ttatgttaga acgaactaaa caagagatga acattaatgg 1200 gaagcatata gagttttatt atgctccgaa gcaaatatgg tacatataaa tggtgtatta 1260 caatggcctt ggtgcttcgg attttatctt gatgaggcac ttgttgatgg tactctcgag 1320 cagtgtttcg aggtcctttc tggatacgga gtcggattgg gcctgtgata ccgagtctcc 1380 tgggtctaac tctggtgtgt gtaatcggtg tagtttctgg taaggatatt ctgttgagtc 1440 gttgtcaaag tctgttggtg ttgtcgatgg gtccattctc atggactgag aacgaaagtg 1500 ttccagcctt gttgggcctg atgagcttgg tagcccaatc tgagactttg tggcccatgt 1560 ttcgccaggt aagatggtaa tgggcctgtg gctgatgggt ctttgacaac gagcagttgg 1620 agttggattt agtaatcttc gtcgtgtttc tcctttttcc acggaccaga agtctatgca 1680 atcgtttgtg tatcccttgg acaatatgtt aattgttggg ggtttgaaac gtatgtccgt 1740 ggaatgttta gccgatgaca atcggagctt ggccttgatg gatgcgaatt tcacgccttc 1800 tatgacgttg gagtcttcga ccctgtacat gattctccaa ggggagggtt ctgaaattga 1860 aaaatatgta gatgagaagt agtggaggtc gacgttacaa gctattggga aagtgaatgc 1920 tgcttgagct gcgtcttcaa ggctgacgcg attgtctttg atttctacga taaccgaccc 1980 agttgcgtta aatgggacct ggtttcggta ttcaattata atgtggtcga ttttcataca 2040 tcggcctttg agtcgcatgg tcgcctgctc gaatgagctc ggaaattgga gattgattgg 2100 tgcagcatcg ttggttaatg cgtactctgt gcgtttgctg ttgatgtaat tattgtctgt 2160 gacggtgaat tggttgtcca ttctatgaat ggaaaaaaca agggttaatc aacggagaga 2220 agaaatgtat acaagtcaga gcaaggttta taaaatgtat tgtagacatg gaagcatata 2280 tgcatttggt attgataata acacactaaa gcagaacaag gatcatatat gtataattgg 2340 ccgcgcagcg gattggaagt catataaacc ggcgaataaa tgaaaaagtc gaatgggtta 2400 tgggagtgaa acgacttacg gaagcaccga ggaagcagtc tggattgaat gccggttata 2460 atttggagaa atcaaagaaa taaaaggata acttatttgt atagaaagga aagtgagcag 2520 atgttatgct ccgtgtcgtt aaatgagatg ctatgggtgt ttatataggc gttaataagc 2580 gacacatggt agagagagaa agaagagaga ggcgagagca atcggggggc actcaaagtc 2640 tgtagcaatc gggggaacgg ggggcaattt atgtgatgcc ccctaaatgg catttatgta 2700 atatcctcat tgaatttgaa attcaaacgt ggaaagcggc catccgtata atatt 2755 //