ID AJ704945; SV 1; circular; genomic DNA; STD; VRL; 2762 BP. XX AC AJ704945; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA B, complete DE sequence, isolate EACMZV-[K272] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2762 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; d8792bb4400c8f7cc4594e5bb9cffecc. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K272]" FT /mol_type="genomic DNA" FT /country="Kenya:Makueni, Kibwezi" FT /clone="K272FB-2[2002]" FT /db_xref="taxon:223275" FT CDS 336..1136 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:Q1JU28" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q1JU28" FT /protein_id="CAG29055.1" FT /translation="MSPVRQCKMYSVYRRGYKTPYRSPYGSRVTPYVNRKTAVKQTAKS FT RVSRKLAYESPRGLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLSLRVSGTVNISQSGGDDNMGERTTMRGIFFMVCLVDKKPFVPEGVSILPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT CDS complement(1266..2189) FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:Q1JU27" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q1JU27" FT /protein_id="CAG29056.1" FT /translation="MDNHFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNATGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWKILYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPTAHSQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLEHFRSQSMRMDPSITPTDLDNESTEYPYQRLHRLNTPELDPGDSVSQTQSDSVSR FT KDLETLLESTINKCLIKIKSEAPRPL" XX SQ Sequence 2762 BP; 771 A; 449 C; 728 G; 814 T; 0 other; accggatggc cgcgcccgaa aaagcagatg ggccccagaa tggcccccac gcactaagta 60 atgtcagcca accatgtgca agactgggag actcggtagt tacgaatgga ggattaagtg 120 gtccctacgc actaagtttg acaggcaatt ttattgctat gtgtgtatca tatttttata 180 ggtgtgatac ggggcaatct aaaggtatgt tatggggcct atcataaaaa agcaaaatag 240 gggttcctat tgacatatgg attatagttt tatgtgcgga tatatgatcc gccacgtgtt 300 tataatggat atggattgtc ctataaatat ttggcatgtc tcccgttcgt caatgcaaga 360 tgtattctgt atacagacgt gggtataaga cgccgtatag gagtccgtat ggctctcgtg 420 taacaccata tgtgaatcgt aagaccgctg ttaaacagac ggcgaaatcg cgtgtatcgc 480 gaaagttggc gtatgaatcg ccaagaggtc tatatacgcg acgctcattg gaggatatcc 540 ataatggggc ttccttgaag ttgcctcaac aaggggatta tacgtcctac gtgacactcc 600 catgtcgagg catcgatggt aatgggggta ggtctgttga tcatataaaa ttattaagct 660 tgagggtttc tgggaccgtc aacatcagtc aatccggtgg tgatgacaat atgggagaaa 720 gaacgaccat gaggggtatt tttttcatgg tttgtcttgt ggataagaaa cctttcgttc 780 cagagggggt cagcatattg ccaacgttca atgagttgtt tggggaatat gaatccgtat 840 atggcatgcc taggttgaag gaaaacgtcc gtcaccgtta tcgcgttatt gggacgtcga 900 aattatatat aacgaccgat gaagatcata tccagaagcc ttttagtcta cgtcgaagac 960 taagtggagg gaaatatcct atatggtcgt cgttcaagga tgtggataat agtagtacag 1020 gtggtaacta taaaaatata aataagaacg ctatactcgt tagttatgtg tgggtttcgc 1080 tatgtcggac cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggctgataat 1140 aaaacgatat aagtgttgta tggacattaa agatgttgga tcgaactaaa caagagatga 1200 acattaatgg gaagcataaa gagttttatt atgtgccgaa gcaaatatta tatataaatg 1260 gtttattaca atggccttgg tgcttcggat ttgatcttga ttaggcactt gttgatggta 1320 ctctcaagca gtgtctcgag atcctttctg gatactgagt cggattgggt ctgtgatacc 1380 gagtctccgg ggtctaactc aggtgtgttt aatctgtgta gtcgctggta aggatattcg 1440 gtggactcgt tgtctaagtc cgttggtgtt atcgatgggt ccattctcat ggactgtgaa 1500 cgaaagtgtt ccagccttgc tgggccggat gagcttggta gcccaatctg agactttgtg 1560 gcccatgttt ctccaggtag gatggtgatg ggcctgtggg ttatgggtcg ttgactatga 1620 gcagttggag ttggatttag taatctccgt cttgtttctc ctttttccac ggaccagaag 1680 tctatgcagt cttttgtgta tcccttggat aagatgttaa ttgttggggg tttgaaacgt 1740 atgtccgtgg aatgtttggc cgaggataat ctgagcttgg ccttgatgga tgcgaatttc 1800 acgccttcta tgacgtttga gtcttcgact ctgtatagga ttttccaagg ggagggttct 1860 gaaatcgaaa aatatgtaga agagaagtag tggaggtcta cgttgcaagc tatggggaaa 1920 gtgaatgctg cctgagctgc gtcttcaagg ctgacgcgat tatctctgat ttctacgata 1980 accgacccag ttgcgttaaa cgggacctgg tttcggtatt caattataat gtggtcgatt 2040 ttcatacatc ggcctttgag tcgcatggtc gcctgctcga atgagctcgg aaattggaga 2100 ttgattggtg cagcatcgtt tgttaaggcg tactctgtgc gtttgctgtt tatgtaatta 2160 ttgtctgtga cggtgaaatg gttgtccatt ctatgaattt aaaaaagaag ggttagtaaa 2220 cggagagaag tcagaataag gtgtataaaa tgtcttgtag acatgtaagc atatatgcat 2280 ttggtatata taagaacaca cgaaatcaga acaaggacca tatatgttga attggccgcg 2340 cagcggattg gaattcagaa aaatctacca acaaaggaaa aagtcgaatg gtgttatgtg 2400 atgtaaatca cttacagaat cactgatgaa gcagtctgga gtgaattcct gtgtcaattg 2460 ggcgacaaaa aaaagaaata taagttaacg aaataaaatt ataacgtatt gggagaaaag 2520 ggaaagtgag catatgttat gcgccgtgtc gttaagtgat atgctatggg gtgtttatat 2580 aggcgttaat aagcgacagg tggtagagag agaaagaaga gagaagcgag agcaattgga 2640 gacacctcgg tggatgtctc tacggaattg gagacaatat atagtgtctc caaatggcat 2700 aatggtaatt aggtagatct attttcaaaa tttgaaccaa aagcggccat ccgtataata 2760 tt 2762 //