ID AJ704944; SV 1; circular; genomic DNA; STD; VRL; 2762 BP. XX AC AJ704944; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA B, complete DE sequence, isolate EACMZV-[K3] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2762 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; f652e4102f0456ceca3e90cd76e144b7. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K3]" FT /mol_type="genomic DNA" FT /country="Kenya:Kilifi, Kwakadzengo" FT /clone="K3FB-3[2001]" FT /db_xref="taxon:223275" FT CDS 336..1136 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:Q1JU30" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q1JU30" FT /protein_id="CAG29053.1" FT /translation="MSPVRQCKMYSVYRRWYKTPYRSPYGSRVTPYVNRKTAVKQTAKS FT RVSRKLAYESPKGLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLSLRVSGTVNISQSGGDDNMGERTTMRGIFFMVCLVDKKPFVPEGVSILPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT CDS complement(1268..2191) FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:Q1JU29" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q1JU29" FT /protein_id="CAG29054.1" FT /translation="MDNHFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNATGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWKILYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPTAHNQRPITHRPITILPGETWATKSQIGLPSSSG FT PARLDHFRSQSMRMDPSTTLTDLDNESTEYPYQRLHRLNTPELDPGDSVSQTQSDSVSR FT KDLETLLESTINKCLIKIKSEAPRPL" XX SQ Sequence 2762 BP; 771 A; 448 C; 721 G; 822 T; 0 other; accggatggc cgcgcccgaa aaagcagatg ggccccagaa tggcccccac gcactaagta 60 atgtcagcca accatgtgca agactgggag actcggtagt tacgaatgga ggattaagtg 120 ggccctacgc actaagtttg acaggcaatt ttattgctat ctgtgtatca tatttacata 180 ggtgtgttac gggtcaatct aaaggtatgt tatggggcct atcataaaaa agcaaaatat 240 aggttcctat ttacatattg attatagttt catgtgcgga tatatgatcc gccacgtgtt 300 tataatggat atggattgtc ctataaatac ttggcatgtc tcccgttcgt caatgcaaga 360 tgtattctgt atacagacgt tggtataaga cgccgtatag gagtccgtat ggctcgcgtg 420 taacaccata tgtgaatcgt aagaccgctg ttaaacagac ggctaaatcg cgtgtatcgc 480 gaaagttggc gtatgaatcg ccaaaaggtc tatatacgcg acgctcattg gaggatatcc 540 ataatggggc ttccttgaag ttgcctcaac agggggatta tacgtcctac gtgacactcc 600 catgtcgagg catcgatggt aatgggggta ggtctgttga tcatataaaa ttattaagct 660 tgagggtttc tgggaccgtc aacatcagtc aatccggtgg tgatgacaat atgggagaga 720 gaacgaccat gaggggtatt tttttcatgg tttgtcttgt tgataagaaa cctttcgttc 780 cagagggggt cagcatattg ccgacgttca atgagttgtt tggggaatat gaatccgtgt 840 atggcatgcc taggttgaag gaaaacgtcc gtcaccgtta tcgcgttatt gggacgtcga 900 aattatatat aacgaccgat gaagaccata tccagaagcc ttttagtcta cgtcgaagac 960 taagtggagg gaaatatcct atatggtcgt cgttcaagga tgtggataat agtagtacag 1020 gtggtaacta taaaaatata aataagaacg ctatactcgt tagttatgtg tgggtttcgc 1080 tatgtcggac cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggctgataat 1140 aaaactatat aagtgtttta tggacattaa tgatgtggga tcgaactaaa caagagatga 1200 atattaatgg gaagtataaa gagttttatt atgtgccgaa gcaaatattg tacatataaa 1260 tggtttatta caatggccgt ggtgcttcgg atttgatttt gataaggcac ttgttgatgg 1320 tactctcaag cagtgtctcg agatcctttc tggatactga gtcggattgg gtctgtgata 1380 ccgagtctcc tgggtctaac tctggtgtgt ttaatctgtg tagtctctgg taaggatatt 1440 cggtggactc gttgtctaag tctgttagtg ttgtcgatgg gtccattctc atggactgtg 1500 aacgaaagtg gtccagcctt gctgggccgg atgagcttgg tagcccaatc tgagactttg 1560 tggcccatgt ttctccaggt aggatggtga tgggcctgtg ggttatgggt cgttgattat 1620 gagcagttgg agttggattt agtaatctcc gtcttgtttc tcctttttcc acggaccaga 1680 agtctatgca gtcttttgtg tatcccttgg ataagatgtt aattgttggg ggtttgaaac 1740 gtatgtccgt ggaatgtttg gccgaggata atctgagctt ggcctttatg gatgcgaatt 1800 tcacgccttc tatgacgttt gagtcttcga ctctgtatag gattttccaa ggggagggtt 1860 ctgaaatcga aaaatatgta gaagagaagt agtggaggtc tacgttgcaa gctatgggga 1920 aagtgaatgc tgcctgagct gcgtcttcaa ggctgacgcg attatctctg atttctacga 1980 taaccgaccc agttgcgtta aatgggacct ggtttcggta ttcaattata atgtggtcga 2040 ttttcataca tcggcctttg agtcgcatgg tcgcctgctc gaatgagctc ggaaattgga 2100 gattgattgg tgcagcatcg tttgttaagg cgtactctgt gcgtttgctg tttatgtaat 2160 tattgtccgt gacggtgaaa tggttgtcca ttctatgaat ttaaaaaaca agggttagta 2220 aacggagaga agtcagaata aggtttataa aacgtcgtag acatgtaagc atatatgcat 2280 tgggtatata taagaacaca ctaaatcaga acaaggacca tatatgttga attggccgcg 2340 cagcggattg gaattcagaa aaatctatta acaaaggaaa aagtcgaatg gggtgatgtg 2400 atgtaaatca cttacagaat cactgatgaa gcagtctgga gtgaattcct gtttcaattg 2460 ggagaaaaaa acagaaataa aagtgaacga aataaaaagt ataacgtatt gggagaaaaa 2520 ggaaagtgag catatgttat gcgccgtgtc gttaagtgat atgctatggg gtgtttatat 2580 aggcgttaat aagcgacagg tggtagagag agaaagaaga gagaagcgag agcaattgga 2640 gacacctcgg ttgatgtctc tactgaattg gagacaatat atagtgtctc taaatggcat 2700 aatggtaatt aggtagatct attttcaaaa tttgaaccaa aagcggccat ccgtataata 2760 tt 2762 //