ID AJ704942; SV 1; circular; genomic DNA; STD; VRL; 2747 BP. XX AC AJ704942; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA B, complete DE sequence, isolate EACMZV-[K19] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RA Bull S.E.; RT ; RL Submitted (13-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; f5888471033db228b33216a793db37f7. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K19]" FT /mol_type="genomic DNA" FT /country="Kenya:Malindi, Fulunzi" FT /clone="K19FB-3[2001]" FT /db_xref="taxon:223275" FT CDS 336..1136 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:Q1JU34" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q1JU34" FT /protein_id="CAG29049.1" FT /translation="MSLVRQCKMYSVYRRGYKTPYRSPYGSRVTPYVNRKTAVKQTSKS FT RVSRKLAYESPKGLYTRRSLEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLSLRVSGTVNISQSGGDDNMGERTTMRGIFFMVCLVDKKPFVPEGVSILPTFNELFG FT EYESVYGMPRLKENIRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT CDS complement(1268..2344) FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:Q1JU33" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q1JU33" FT /protein_id="CAG29050.1" FT /translation="MNSNPLRGQFNIYGPCSDLVYSCIYRMHICLHVYIVLTSLRLLTL FT VFFIHSMDNQFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLKGRCMKIDH FT IIIEYRNQVPFNATGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSSTYFSISEP FT SPWKILYRVEDSNVIEGVNFASIKAKLRLSSAKHSTDIRFKPPTINILSKGYTKDCIDF FT WSVEKGETRRRLLNPTPTAHSQRPITHRPITILPGETWATKSQIGLPSSSGPARLEHFR FT SQSMRMDPSTTPTDLDNESTEYPYQRLHRLNTPELDPGDSVSQTQSDSVSRKALETLLE FT STINKCLIKIKSEAPRPL" XX SQ Sequence 2747 BP; 769 A; 450 C; 712 G; 816 T; 0 other; accggatggc cgcgcccgaa aaagcagatg ggccccagaa tggtccccac gcactaagta 60 atgtcagcca atcatgtgca agactgggag actcggtagt tacgaaagga ggatgaagtg 120 gtccctacgc actaagtgtg acaggcaagt ttattgctat gtgtgtatta tatttttata 180 ggtgtgttac gggtccatct aaaggtatgt tatggggcct atcataaaaa agcaaaatat 240 aggttcctat ttacatatgg attataagtt tatgtgcgga tatatgatcc gccacgtgtt 300 tataatggat atggagtgtc ctataaatat ttggcatgtc tctcgttcgt caatgcaaga 360 tgtattctgt atacagacgt gggtataaga cgccgtatag gagtccgtat ggctcgcgtg 420 taacaccata tgtgaatcgt aagaccgctg ttaaacagac gtctaaatct cgtgtatcgc 480 gaaagttggc gtatgaatcg ccaaaaggtc tatatacgcg acgctcattg gaggatatcc 540 ataatggggc ttccttgaag ttgccacaac agggggatta tacgtcctac gtgacactcc 600 catgtcgagg catcgatggt aatgggggta ggtctgttga tcatataaaa ttattaagct 660 tgagggtttc tgggaccgtc aacatcagtc aatccggtgg tgatgacaat atgggagaga 720 gaacgaccat gaggggtatt tttttcatgg tttgtcttgt tgataagaaa ccattcgttc 780 cagagggggt cagcatattg ccgacgttca atgagttgtt cggggaatat gaatccgtgt 840 atggcatgcc taggttgaag gaaaacatcc gtcaccgtta tcgcgttatt gggacgtcga 900 aattatatat aacgaccgat gaagatcaca tccagaagcc gtttagtcta cgtcgaagat 960 taagtggagg gaaatatcct atatggtcgt cgttcaagga tgtggataat agtagtacag 1020 gtggtaatta taaaaatata aataagaacg ctatactcgt tagttatgtg tgggtttcgc 1080 tatgtcggac cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggctgataat 1140 aaaactatat aattgtttta tggatatgaa tgatgtggga tcgaacgaaa caataaatga 1200 acattaatgg gaagcataaa gagttttatt atgtgccgaa gcaaatattg tacatataaa 1260 tggtttatta caatggcctt ggtgcttcgg atttgatctt gatgaggcac ttgttgatgg 1320 tactctcaag cagtgtctcg agagcctttc tggatactga gtcggattgg gtctgtgata 1380 ccgagtctcc tgggtctaac tctggtgtgt ttaatctgtg tagtctctgg taaggatatt 1440 cggtggactc gttgtctaag tctgttggtg ttgtcgatgg gtccattctc atggactgtg 1500 aacgaaagtg ttccagcctt gctgggccgg atgagcttgg tagcccaatc tgagacttcg 1560 tggcccatgt ttctccaggt aggatggtga tgggcctgtg ggttattgga cgttgactat 1620 gagcagttgg agtaggattt agtaatctcc gtcttgtttc tcctttttcc acggaccaga 1680 agtctatgca gtcttttgtg tatcccttgg ataagatgtt aatcgttggg ggtttgaaac 1740 gtatgtccgt ggaatgttta gccgaggata atctgagctt tgccttgatg gatgcgaagt 1800 tcacgccctc tatgacgttt gagtcttcga ctctgtatag gattttccaa ggggagggtt 1860 ctgaaatcga aaaatatgta gaagagaagt agtggaggtc tacgttgcaa gctatgggga 1920 aagtgaatgc tgcctgcgct gcgtcttcaa ggctgacgcg attatctctg atttctacga 1980 taaccgaccc agttgcgtta aatgggacct ggtttcggta ttcaattata atgtggtcga 2040 ttttcataca tcggcctttg agtcgcatgg tcgcctgctc gaatgagctc ggaaattgga 2100 gattgattgg tgcagcatcg tttgttaatg cgtattctgt gcgtttgctg tttatgtaat 2160 tattgtccgt gacggtgaat tggttgtcca tgctatgaat gaaaaaaaca agggttagta 2220 aacggagaga agtcagcaca atgtagacat gtaagcatat atgcattcgg tatatacaag 2280 aatacactaa atcagaacaa ggaccatata tgttgaattg gccgcgcagc ggattggaat 2340 tcataaaaat ctactaacaa ataaaaaagt cgaatggtgt tatgtgatgt aaatcactta 2400 cataatcact gatgaagcag tctggagtga attcctggtt caattgggac acaaaaaaag 2460 aaataaaagt taacgaaata aatgtataac gtattgggat aaaaaggaaa gtgagcatat 2520 gttatgcgcc gtgtcgttaa atgatatgct attgggtgtt tatataggcg ttaataagcg 2580 ataggtggta gagagagaaa gaagagagaa gcgagagcaa ttggagacac cccggttgat 2640 gtctctactg aattggagac aatatatagt gtctccaaat ggcataatgg taattaggta 2700 gatctatttt caaaatgtga accaaaagcg gccatccgta taatatt 2747 //