ID AJ704940; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC AJ704940; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic Zanzibar virus segment DNA B, complete DE sequence, isolate EACMZV-[K18] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic Zanzibar virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Bull S.E.; RT ; RL Submitted (12-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; f3dec8a0017d12a8d15faaed74e6aeb2. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="East African cassava mosaic Zanzibar virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMZV-[K18]" FT /mol_type="genomic DNA" FT /country="Kenya:Malindi, Kasumalini" FT /clone="K18FB-2[2001]" FT /db_xref="taxon:223275" FT CDS 361..1137 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:Q1JU38" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q1JU38" FT /protein_id="CAG29045.1" FT /translation="MYSVYRRGYKTPYRSPYGSRITPYVNRKTSVKQTAKARVSRKLAY FT ESPKGLYTRRSMEDIHNGASLKLPQQGDYTSYVTLPCRGIDGNGGRSVDHIKLLSLRVS FT GTVNVSQSGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPMWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRTTCDVYAQFVLNYVG" FT CDS complement(1268..2266) FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:Q1JU37" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q1JU37" FT /protein_id="CAG29046.1" FT /translation="MLPCLPDLLFISSLRLLTLVVFLHSMDNQFTVTDNNYINSKRTEY FT ALTNDAAPINLQFPSSFEQATMRLKGRCMKIDHIIIEYRNQVPFNATGSVIVEIRDNRV FT SLEDAAQAAFTFPIACNVDLHYFSSTYFSISEPSPWRIVYRVEDSNVIEGVKFASIKAK FT LRLSSAKHSTDIRFKPPTINILSKGYTKDCIDFWSVEKGETRRRLLNPTPHAHSPRPIT FT HRPITILPGETWATKSQIGLPSSSGPARLEHFRSQSMRMDPSTTPTDLDNESTEYPYQR FT LHRLHTPDLDPGDSISQAQSDSVSRKDLETLLESTINKCLIKIKSQAPRPL" XX SQ Sequence 2743 BP; 769 A; 464 C; 716 G; 794 T; 0 other; accggatggc cgcgcccgaa aaaagcatat ggaccccaca atggccccca cgcactaaga 60 aatgtcagcc aaccatgtgc aaggctggaa gactcggtag ttacgcatgg atgagtaagt 120 ggtccctacg cactaagttg gacaggcaat tgtattgccc tgtttgtatc atatttgtat 180 aggtgtgcta ctggccaata taaagttatg ttatggggcc tagcataaaa aagcaaaata 240 taggtcccta tttacatatg gattataatt ttatgtgcgg atataggagc cgccacgtgt 300 ttaaaatgga tatggattgt cctataaata ttttgcatgt ctcccgttct ttaatgcaag 360 atgtattctg tttacagacg tgggtataag acgccgtata ggagtccgta tggctcccgt 420 ataacaccat atgttaatcg taagacctct gttaaacaga cggcgaaagc tcgtgtatcg 480 cgaaagttgg cgtatgaatc gccaaaaggt ctgtatacgc gtcgctcaat ggaggatatc 540 cataatgggg cgtccttgaa gttgcctcaa cagggggatt atacgtccta cgtgacactc 600 ccatgtcgag gtattgatgg taatgggggt aggtctgttg atcatataaa attattaagc 660 ttaagggtgt ctgggaccgt caacgttagt caatccggtg gtgatgacaa tatgggagag 720 agaacgacca tgaggggtat ttttttcatg gcttgtcttg tggataagaa acctttcgtc 780 ccagaggggg tcagcatatt gccgacgttc aatgagctgt tcggggaata tgaatccgtg 840 tatggtatgc ctaggttgaa ggaaaatgtc cgtcaccgtt atcgcgttat tgggacgtcg 900 aaattatata taacgaccga tgaagatcac atccagaagc catttagtct acgacgaaga 960 ctaagtggag ggaaatatcc tatgtggtcg tcgttcaagg atgtggataa tagtagtaca 1020 ggtggtaact ataaaaatat aaataagaac gctatactcg ttagttatgt gtgggtttcg 1080 ttatgtcgga ccacgtgtga tgtgtatgcg cagtttgtac ttaattacgt cggctgataa 1140 taaaacgaat aagttgtgta ttgacatgaa ttatgttgga acgaactaaa caagagatga 1200 acattaatgg gaagcatata gagttttatt atgtcccgaa gcaaatacgg tacataaaaa 1260 tggtttatta caatggcctt ggtgcttggg attttatctt gatgaggcac ttgttgatgg 1320 tactctcaag cagtgtctcg aggtcctttc ttgatactga gtcggattgg gcctgtgata 1380 tcgagtcccc tgggtctaaa tctggtgtgt gtaatctgtg tagtctctga taaggatatt 1440 ctgttgactc gttgtctaag tctgttggtg ttgtcgatgg gtccattcgc atggactgtg 1500 aacgaaagtg ttccagcctt gctgggcctg atgagcttgg tagcccaatc tgagactttg 1560 tggcccatgt ctctccgggt aggatggtga tgggcctgtg ggttatgggt cgtggactat 1620 gagcatgtgg agttggattc agtaatctcc gtcttgtttc tcctttttcc acggaccaga 1680 agtctatgca gtcttttgtg tatcccttgg ataagatgtt aattgttggg ggtttgaaac 1740 gtatgtccgt ggaatgtttg gccgatgata atcggagctt ggccttgatg gaggcgaatt 1800 tcacgccttc tatgacgttt gagtcttcga ctctgtacac gattctccaa ggggagggtt 1860 ctgaaatcga aaaatatgta gaagaaaagt agtggaggtc tacgttgcaa gcaatcggga 1920 aagtgaatgc tgcttgagct gcgtcttcaa ggctgacgcg attgtctctg atttctacga 1980 taaccgaccc agttgcgtta aatgggacct ggtttcggta ttcaattata atgtggtcga 2040 tcttcataca tcggcctttg agtcgcatgg tcgcctgctc gaatgagctc ggaaattgga 2100 gattgattgg tgcagcatcg tttgttaatg cgtactctgt tcgcttgctg tttatgtaat 2160 tattgtctgt gacggtaaat tggttgtcca tgctatgaag gaaaacaaca agggttagta 2220 aacggagaga agagatgaat aaaaggtctg gtagacatgg aagcatatat gcatgtgtga 2280 tatataaaaa cacactaaat cagaacaagg atcatatatg ttaatctggc cgcgcagcgg 2340 tttggaattc agataaacgg ctaacaaata acaaagtcga aaggggtatg tgatggaaat 2400 cacctaccgg atcaccgatt aagcagactg gaatgaattc ctgtttcaaa tgggagaaaa 2460 caaagaaata aaataaaaag aagaacttat tgggataaaa aggaaaatga gcaaatgtta 2520 tgcgccgtgg cgttaaatga tatgctattg ggtgtttata taggcgttaa taagcgacac 2580 gtggtagaga gagaaagaag agagaggcga gagcaattgg agacacctcg gttgatgtct 2640 ctactgaatt ggagacaata tatagtgtct ccaaatggca taatggtaat taggtagatc 2700 tattttcaaa atttgaacca aaagcggcca tccgtataat att 2743 //