ID AJ704936; SV 1; circular; genomic DNA; STD; VRL; 2755 BP. XX AC AJ704936; XX DT 12-MAY-2006 (Rel. 87, Created) DT 14-SEP-2006 (Rel. 89, Last updated, Version 3) XX DE East African cassava mosaic virus segment DNA B, complete sequence, isolate DE EACMV-[K24] XX KW BC1; BV1; complete genomic segment; MP gene; NSP gene. XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2755 RA Bull S.E.; RT ; RL Submitted (12-MAY-2004) to the INSDC. RL Bull S.E., Disease & Stress Biology, John Innes Centre, Colney Lane, RL Norwich, Norfolk, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Bull S.E.; RT "Diversity of cassava-infecting geminiviruses in Kenya"; RL Thesis (2005), MSc (Research), University of East Anglia, Norwich, UK. XX RN [3] RX DOI; 10.1099/vir.0.82013-0. RX PUBMED; 16963765. RA Bull S.E., Briddon R.W., Sserubombwe W.S., Ngugi K., Markham P.G., RA Stanley J.; RT "Genetic diversity and phylogeography of cassava mosaic viruses in Kenya"; RL J. Gen. Virol. 87(Pt 10):3053-3065(2006). XX DR MD5; 8dc3e6644ddb1ee4c2f0787e4adee3dc. XX FH Key Location/Qualifiers FH FT source 1..2755 FT /organism="East African cassava mosaic virus" FT /segment="DNA B" FT /host="Manihot esculenta" FT /isolate="EACMV-[K24]" FT /mol_type="genomic DNA" FT /country="Kenya:Machakos, Katumani" FT /clone="K24FB-1[2001]" FT /db_xref="taxon:62079" FT CDS 326..1126 FT /gene="NSP" FT /product="BV1" FT /function="nuclear shuttle protein" FT /db_xref="GOA:Q1JU46" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q1JU46" FT /protein_id="CAG29037.1" FT /translation="MSPVRQCKMYSVYRRGYKTPYRSPYGARGTSYVNRKTSGKQTAKS FT RVSRKLAYESPKGLYTRRSLEDIHNGAALKLPQQGDYTSYVTLPCRGIDGNGGRSVDHI FT KLLSLRVSGTVNVSQSGGDDNMGERTTMRGIFFMACLVDKKPFVPDGVSILPTFNELFG FT EYESVYGMPRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKD FT VDNSSTGGNYKNINKNAILVSYVWVSLSRTTCDVYSQFVLNYVG" FT CDS complement(1257..2306) FT /gene="MP" FT /product="BC1" FT /function="movement protein" FT /db_xref="GOA:Q1JU45" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q1JU45" FT /protein_id="CAG29038.1" FT /translation="MCSYIYSLHICFHVYKTFYPPCSAFLYLYSLRLLTLAFFIHRMDN FT QFTVTDNNYINSKRTEYALTNDAAPINLQFPSSFEQATMRLKGRCMKIDHIIIEYRNQV FT PFNATGSVIVEIRDNRVSLEDAAQAAFTFPIACNVDLHYFSSTYFSISDPSPWKIMYRV FT EDSNVVEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKGYTKDCIDFWSVEKGETR FT RRLLNPTPHAHSPRPIAHRPITILPGETWATKSQIGLPSSSGPTRLEHFRSQSMRMDPS FT TIPTDLDNDSTDYPYQRLHRLHTPELDPGDSVSQAQSDSVSRKDLETLLESTINKCLIK FT IKSEAPRPL" XX SQ Sequence 2755 BP; 761 A; 454 C; 754 G; 786 T; 0 other; accggatggc cgcgcccgaa aagcagatgg accccacaat ggcccccacg cactaagaaa 60 tgtcagccaa ccatgtgcaa gactgggaga cgcggtattt acgcatggag gattaagtgg 120 gccctacgta ctaagtttga caggcaattt tattgcgatg tgtgtatcat ttgtttatag 180 gtgtgttacg ggccaatcta aagttatgtt atggggccta tcataaaaaa gcaaaatata 240 ggttcctatt tacatattga ttatagtttt atgtgcggat atatgatccg ccacgtgtta 300 tgaatttgtc ctataaatag tttacatgtc tcccgttcgt caatgcaaga tgtattcggt 360 atacagacgt gggtataaga cgccgtatag gagtccgtat ggcgctcgtg gaacatcata 420 tgtgaatcgt aagacctctg gtaaacagac ggctaaatct cgtgtatcgc gaaagttggc 480 gtatgaatcg ccaaaaggtc tatatacgcg acgctcattg gaggatatcc ataatggggc 540 tgccttgaag ttgccgcaac agggggatta tacgtcctac gtgacactcc catgtcgagg 600 catcgatggt aatgggggta ggtctgtgga tcatataaaa ttattaagtt tgagggtttc 660 tgggaccgtc aacgtcagtc aatccggtgg tgatgacaat atgggagaga gaacgaccat 720 gaggggtatt tttttcatgg cgtgtcttgt tgataagaaa cctttcgttc cagatggggt 780 cagcatattg ccgacgttta atgagttgtt cggggaatat gaatccgtgt atggcatgcc 840 taggttgaag gaaaacgtcc gtcaccgtta tcgcgttatt gggacgtcga aattatatat 900 aacgaccgac gaagatcaca tccagaagcc ttttagtcta cgtcgaagac taagtggagg 960 gaaatatcct atatggtcgt cgttcaagga tgtggataat agtagtacag gtggtaacta 1020 taaaaatata aataagaacg ctatactcgt tagttatgtg tgggtttcgc taagtcggac 1080 cacgtgtgat gtgtattcgc agtttgtact taattacgtc ggctgataat aaaactatat 1140 aagtgtttga tggacattaa ttatgttgga acgaacgaaa aagagatgaa catgaatggt 1200 aagcatatag agttttatta tgttccgaag caaatatggt acatataaat ggttcattat 1260 aatggccttg gtgcttcgga tttgatcttg atgaggcact tgttgatggt actctcaagc 1320 agtgtctcga ggtcctttct ggagactgag tcggattggg cctgtgatac cgagtcccct 1380 gggtctaact ctggtgtgtg taatctgtgt agtctctggt aaggatagtc tgtggagtcg 1440 ttgtctaagt ctgttggtat tgtcgatggg tccattcgca tggactgtga acgaaagtgt 1500 tccagccttg ttgggccgga ggagctgggt agcccaatct gagactttgt ggcccatgtt 1560 tctccaggta ggatggtgat gggcctgtgg gctatgggtc ttggactatg agcatgtgga 1620 gttggattta gtaatctccg tcttgtttct cctttttcca cagaccagaa gtctatgcag 1680 tctttcgtgt atcccttgga taagatgtta attgttgggg gtttgaaacg tatgtctgtg 1740 gaatgtttgg ccgaggataa tcggagcttg gctttgatgg aagcgaattt cacgccttct 1800 acgacgttgg agtcttcgac tcggtacatt attttccaag gggaggggtc cgaaatcgaa 1860 aaatatgtag aagagaagta gtggaggtcg acgttgcaag ctattgggaa agtgaatgct 1920 gcttgagctg cgtcttcaag gctgacgcga ttgtctctga tttctacgat aaccgaccca 1980 gtggcgttaa atgggacctg gttgcggtat tcaattataa tgtggtcgat tttcatacat 2040 cggcctttga gtcgcatggt cgcctgctcg aatgagctcg gaaattggag attgattggt 2100 gcagcatcgt ttgttaatgc gtactcggtg cgtttgctgt ttatgtaatt attgtctgtg 2160 acggtgaatt ggttgtccat tctatgaatg aaaaaagcaa gggttagtaa acggagagaa 2220 tagaggtata aaaaggcaga acaaggtgga taaaatgtct tgtagacatg gaagcatata 2280 tgcagtgaat agatataaga acacatgaaa tgatagcaag gatcatatat gtgtaactgg 2340 ccgcgcagcg gattggaatg cagataaatc ggcgaacaaa gaataaagtc gaatggggtg 2400 atgtgatgaa accacttact gaatcaccga ggaagcagac gagagtgaat tcctgtttca 2460 agttggagaa aacaaagaaa taaaagtaga acgtattggg ataaaaagga aagagagtag 2520 atgttatgcg tggtgtcgtt aaatgatatg ccatggggtg tttatatagg cgtgaaaagc 2580 cacacgtggt agagagagaa agaagagaga ggcgagagca ttcgggggac actcaaagtc 2640 tctagcaatc gggggaacgg gggtcaattt atatgatgcc ctctaaatgg catttatgta 2700 atatcctcat taaagttgaa gttcaaatgt ggaaagcggc catccgtata atatt 2755 //