ID AJ704602; SV 1; circular; genomic DNA; STD; VRL; 2729 BP. XX AC AJ704602; XX DT 11-MAY-2004 (Rel. 79, Created) DT 11-MAY-2004 (Rel. 79, Last updated, Version 1) XX DE Tomato leaf curl China virus DNA A complete sequence, isolate G16 DNA A XX KW ac1 gene; AC1 protein; ac2 gene; AC2 protein; ac3 gene; AC3 protein; KW ac4 gene; AC4 protein; av1 gene; av2 gene; AV2 protein; coat protein; KW complete genome segment. XX OS Tomato leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2729 RA Zhou X.; RT ; RL Submitted (10-MAY-2004) to the INSDC. RL Zhou X., Zhejiang University, Huajiachi, Institute of Biotechnology, RL Kaixuan Road 268, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Zhou X., Ma X.; RT "Molecular characterization of Tomato leaf curl China virus and its RT satellite DNA"; RL Unpublished. XX DR MD5; 256b9a6fb14823d5634412be17888593. DR EuropePMC; PMC3126389; 21378048. XX FH Key Location/Qualifiers FH FT source 1..2729 FT /organism="Tomato leaf curl China virus" FT /segment="DNA A" FT /host="Lycopersicon esculentum (tomato)" FT /isolate="G16" FT /mol_type="genomic DNA" FT /country="China:Guangxi" FT /db_xref="taxon:229636" FT CDS 125..475 FT /gene="av2" FT /product="AV2 protein" FT /db_xref="GOA:Q6ZX86" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6ZX86" FT /protein_id="CAG28764.1" FT /translation="MWDPLLNQFPETVFGLRCMLAVKYLQLVEHTYSPDTVGYELIRDL FT ISVVRARKYAEATSRYEHFNARMEGTPSAELRQPVRCPCTCPYCPRHVKIKGMGQSAHV FT SEAQDLQNVQEP" FT CDS 285..1058 FT /gene="av1" FT /product="coat protein" FT /db_xref="GOA:Q6ZX45" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q6ZX45" FT /protein_id="CAG28765.1" FT /translation="MPKRLADMSISMPGWKVRRRLNFDSPSAARAPVLIAPAMSKSKAW FT ANRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGNGLTH FT RVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPSGTPSDFQQVFNVYDNE FT PSTATVKNDQRDRYQVIRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(1055..1459) FT /gene="ac3" FT /product="AC3 protein" FT /db_xref="GOA:Q6ZX44" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6ZX44" FT /protein_id="CAG28766.1" FT /translation="MDSRTGELITATQAENGVFIWEITNPLYFKITELQNRPFLSDNDI FT VTVRIQFNHNLRKALGMHQCFLDFRIWTNSHLQTGRFLRVFRTQVLKFLNNLGVISLNN FT VIRAVNYVLWDALTQTTFVQSSHIIKFNLY" FT CDS complement(1200..1607) FT /gene="ac2" FT /product="AC2 protein" FT /db_xref="GOA:Q6ZX43" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6ZX43" FT /protein_id="CAG28767.1" FT /translation="MQSSSASPSHCTQVPIKVQHRIAKKKITRRRRIDLPCGCSYFSSL FT NCANHGFTHRGTHHCNSGREWRFYLGDNKSPVFQDNGTTKQALPVGQRHSDGQDPIQPQ FT PEESTGDAPMFSGLPDMDELTPSDWSFLKSI" FT CDS complement(1507..2592) FT /gene="ac1" FT /product="AC1 protein" FT /function="Rep protein" FT /db_xref="GOA:Q6ZX42" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6ZX42" FT /protein_id="CAG28768.1" FT /translation="MAPPNKFRINAKNYFLTYPHCSLTKEEALSQIKTLETPVNKLFIR FT ICRELHEDGSPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDYVLQFH FT NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSSARPLRPISIVIEGNS FT RTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEYLDEEKNSALKSWAIKNAVFVSITEPLY FT SSTYQSPAQDSQEENNQETED" FT CDS complement(2142..2435) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6ZX41" FT /protein_id="CAG28769.1" FT /translation="MGLLTCMCSSNSKENSSVKIKDSSISHPQAGQHISIRTFRQLKAQ FT QMSSPTWTKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2729 BP; 696 A; 576 C; 623 G; 834 T; 0 other; accggatggc cgcgcgattt ttttggtggt cccccctatc cttcgtccaa tcagaagcgc 60 gcctcaaagc ttatttatca tcttttcctt ataaatactt ggccaccaag tagtttattg 120 caacatgtgg gatccacttt taaatcagtt cccagagacc gtatttggtc ttaggtgtat 180 gctcgcagtt aagtacctgc aacttgtcga gcatacgtat tctccggata cagttggtta 240 cgagcttatt cgcgatctta tctccgtagt tcgtgcccgt aagtatgccg aagcgactag 300 ccgatatgag catttcaatg cccggatgga aggtacgccg tcggctgaac ttcgacagcc 360 cgtccgctgc ccgtgcacct gtccttattg cccccgccat gtcaaaatca aaggcatggg 420 ccaatcggcc catgtatcgg aagcccagga tctacagaat gtacaggagc cctgatgtgc 480 ctaagggctg tgagggtcca tgtaaggtcc agtcgtttga tgcgaagaac gacattggtc 540 acatgggtaa ggttatatgt ttgtccgatg ttacgagggg aaatggtttg actcatcgag 600 ttggtaaacg tttctgcgtt aagtcattgt attttgtggg caagatttgg atggatgaga 660 acatcaaggt taagaaccac actaacaccg ttttgttctg gattgtccga gacaggcgtc 720 ctagtggcac ccctagtgat tttcagcagg tctttaatgt ttatgataac gagccgtcta 780 ccgctactgt taagaacgat cagcgcgatc gttaccaagt gatacgcagg tttcaggcaa 840 cggtgactgg tggacaatat gcagctaagg aacaggcgat aattagaaga ttttatcgtg 900 ttaataatta cgtagtgtac aatcaccagg aagctgggaa gtacgagaac catactgaaa 960 atgctctgtt gttgtatatg gcatgtactc atgcctctaa ccccgtgtat gctactttga 1020 aagtgaggag ttatttctat gactcagtca cgaattaata aagattaaat tttattatat 1080 gagaactttg tacaaatgtt gtttgcgtta atgcgtccca taatacataa ttcactgctc 1140 taattacatt attcaaacta attacaccca aattattgag aaacttcaaa acttgtgtcc 1200 taaatactct taagaaacga ccagtctgaa ggtgtgagtt cgtccatatc cggaagtcca 1260 gaaaacattg gtgcatcccc agtgctttcc tcaggttgtg gttgaattgg atcctgaccg 1320 tcactatgtc gttgtccgac aggaagggcc tgttttgtag ttccgttatc ttgaaataca 1380 ggggatttgt tatctcccag ataaaaacgc cattctctgc ctgagttgca gtgatgagtt 1440 cccctgtgcg tgaatccatg gttggcgcag ttaagtgagc tgaaataaga acaaccacag 1500 ggaaggtcaa tcctccgtct cctggttatt ttcttcttgg ctatcctgtg ctggactttg 1560 ataggtactt gagtacagtg gctcggtgat gctgacgaag actgcatttt ttattgccca 1620 cgactttaat gcagagttct tttcctcgtc taggtattct ttatagcttg agttgggccc 1680 tggattgcac aggaagatag cgggaatgcc acctttaatt tgaactggct tcccgtactt 1740 tgtgttgctt tgccagtccc tttgggcccc catgaattct ttaaaatgct ttagatagtg 1800 cggatcgacg tcatcaatga cgttgtacca ggcatcatta ttgtatactt ttggactcaa 1860 atcaagatga ccacacaaat aattatgtgg tcctaatgac ctggcccaca ttgttttccc 1920 cgtccgacta ttgccttcga taactatact tatcggtcgt aatggccgcg cagaactgac 1980 gacgttctct gcagcccact cttcgagttc ctctggaact cgatcaaacg aagaagaaga 2040 aaaaggcgaa acataaacct ccatcggagg agtaaaaatc ctatctaaat tattatttaa 2100 attatgaaac tgtaaaacat aatctttagg agctttctcc cttagtatat tgagggccga 2160 agctttggac cctgaattga ttgcctcggc atatgcgtcg ttggcagatt ggcaacctcc 2220 tctagccgat cttccatcga tctggaaaac tccatgatca agcacgtctc cgtctttgtc 2280 catgtaggac ttgacatctg ttgagctttt agctgcctga atgttcggat ggaaatgtgc 2340 tgacctgctt ggggatgtga gatcgaagaa tctttgattt ttacactgga attttccttc 2400 gaattggatg agcacatgca ggtgaggaga cccatcttcg tgtaattctc tgcagatgcg 2460 gataaatagt ttatttactg gggtttctag ggttttaatt tgggaaagtg cttcttcttt 2520 agtgagggag cagtgtggat atgtgaggaa ataatttttc gcatttattc tgaatttatt 2580 tgggggagcc attgactggt caatcggtgt ctctcaaact tggctatgca attggtgtct 2640 ggtgtcttat ttatatgtgg acaccaaatg gcattatcgt aattcccata agaatttcaa 2700 aatccaaaag cggccatccg tataatatt 2729 //