ID   AJ628755; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AJ628755;
XX
DT   22-JAN-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial polyprotein gene for NIb and coat proteins,
DE   genomic RNA, isolate YZ
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Soybean mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1733
RA   Adams M.J.;
RT   ;
RL   Submitted (25-FEB-2004) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [3]
RX   DOI; 10.1007/s00705-004-0390-z.
RX   PUBMED; 15449140.
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Further molecular characterisation of potyviruses infecting aroid plants
RT   for medicinal use in China";
RL   Arch. Virol. 150(1):125-135(2005).
XX
DR   MD5; e34b5a216a02e4c53e6b5f6c07f58c04.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Soybean mosaic virus"
FT                   /host="Pinellia ternata"
FT                   /strain="P"
FT                   /isolate="YZ"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Henan:Yuzhou"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..1482
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5K4D1"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q5K4D1"
FT                   /protein_id="CAF32245.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVIAMYYSCRKQGWSEDEIQQRLVFFANG
FT                   DDIILAVDDKDVWLYDTLSTSFAELGLNYNFDERTRKREELWFMSHKAVLIDGVYIPKL
FT                   EPERIVSILEWDRSKELMHRTEAICAAMIEAWGYTELLQEIRKFYLWLLSKDEFKELAA
FT                   SGKAPYIAETALRKLYTDVNTQESELQRYLEVLDFSHADNCCESVSLQSGKETGEDLDA
FT                   GKETKKNTNNEKGDKSQITQSTQSGKGTTSSGTKDKDINVGSKGKVVPRLQKITRKMNL
FT                   PMIGGKIILNLDHLLEYKPNQVDLFNTRATKTQFTAWYNAVKAEYGLEDEQMGVVMNGF
FT                   MVWCIDNGTSPDISGMWVMMDGEEQVEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMR
FT                   NSEGPYMPRYGLLRNLRDRDLARYAFDFYEVTSKTPNRAREALAQMKAAALTGVNNKLF
FT                   GLDGNISTNAENTERHTARDVNQNMHTLLGMGPPQ"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT   mat_peptide     634..1479
FT                   /product="coat protein"
FT   3'UTR           1483..1733
XX
SQ   Sequence 1733 BP; 540 A; 304 C; 441 G; 448 T; 0 other;
     ggaaacaata gtgggcagcc atctacagta gtggacaaca ctctcatggt tgttattgct        60
     atgtattatt catgccgtaa acaaggatgg tcagaggatg agattcagca gaggctggtg       120
     ttcttcgcca atggggatga tataattctg gcagttgatg ataaagatgt atggctatat       180
     gacactctta gcacctcgtt tgctgagctt ggtcttaatt ataattttga tgagcggacg       240
     aggaaaagag aagagttgtg gttcatgtca cacaaagccg tactaattga tggagtttac       300
     attccgaagc ttgagccaga gcggatagtt tctatcctag aatgggatag aagcaaagag       360
     cttatgcacc gaactgaagc aatttgtgct gcaatgattg aagcatgggg atacacagag       420
     ctgctgcagg aaattcgcaa gttctacttg tggctcctga gcaaagatga attcaaggaa       480
     ctcgctgcat ctggaaaagc accgtatatt gcggagacag ctttgagaaa gctttacacg       540
     gatgttaata cacaggaaag cgagctgcag agataccttg aagttttaga cttcagccat       600
     gcggataatt gttgtgaatc agtctccttg caatcaggga aggagacagg tgaagattta       660
     gatgcaggta aagagacaaa gaaaaacacc aacaatgaaa aaggagataa gtctcagatc       720
     acacaaagca ctcaaagtgg aaaaggaaca acaagttctg gaaccaagga caaggatata       780
     aatgttggat caaaaggcaa agttgttcca cgtctgcaaa agatcacgag gaaaatgaat       840
     ctcccgatga ttggtgggaa aatcatcctt aacctggatc atttgctcga gtacaaaccc       900
     aatcaggttg atttgttcaa tactcgagca acgaaaacac agttcacagc atggtataat       960
     gcagttaagg ctgagtatgg actagaggat gagcaaatgg gtgtggtcat gaatggcttt      1020
     atggtttggt gcatagataa tggtacatcc ccggatatta gtgggatgtg ggtaatgatg      1080
     gatggagaag aacaagttga gtatccgctg aagcctattg ttgaaaatgc aaaaccaact      1140
     ttaaggcaaa tcatgcatca cttctcagat gcagcggaag cttacattga aatgagaaat      1200
     tctgaaggtc cgtatatgcc tagatacgga ctactgagga atttgagaga cagagatctg      1260
     gcgcgttatg cttttgattt ctatgaagtg acttccaaga caccaaatag agcaagagag      1320
     gcattagcgc aaatgaaggc tgcagctctc acgggagtta acaacaagtt gtttggactt      1380
     gatggcaata tctcaaccaa tgccgaaaat actgagaggc acactgcgag ggacgtgaat      1440
     caaaacatgc acactctttt ggggatgggt ccaccgcagt aaaggccagg tgaactggcc      1500
     acagttagca tttcgggtcg ctttatagtt ttctataata ttatgttgca cttgtgtcaa      1560
     gtatagtgtg attgtatcac ctttgctgta cttatactta gtgtggctta gccaccctgg      1620
     tgtgctttat attgtagttt atgaatggca gggagaacta ttgcaatgct ggagccattc      1680
     gcagagtgat tccatcacga gagtggccga agtacggcaa tatttgttgt cct             1733
//