ID   AJ628753; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AJ628753;
XX
DT   22-JAN-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial polyprotein gene for NIb and coat proteins,
DE   genomic RNA, isolate WH1
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Soybean mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1733
RA   Adams M.J.;
RT   ;
RL   Submitted (25-FEB-2004) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [3]
RX   DOI; 10.1007/s00705-004-0390-z.
RX   PUBMED; 15449140.
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Further molecular characterisation of potyviruses infecting aroid plants
RT   for medicinal use in China";
RL   Arch. Virol. 150(1):125-135(2005).
XX
DR   MD5; f053a03e0ec5334af32c6f2853e72c70.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Soybean mosaic virus"
FT                   /host="Pinellia ternata"
FT                   /strain="P"
FT                   /isolate="WH1"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hubei:Wuhan"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..1482
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5K4D3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q5K4D3"
FT                   /protein_id="CAF32243.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVIAMYYSCCKQGWSEREIQERLVFFANG
FT                   DDIVLAVNDKDIWLYDTLSTSFAELGLNYNFDERTRKREELWFMTHKAVLLDGVYIPKL
FT                   EPERIVSILEWDRSKELMHRTEAICAAMIEAWGYTELLQEIRKFYLWLLSKDEFKELAA
FT                   SGKAPYIAEIALRKLYTDVNAHESELQRYLEVLDLSHASNCCESVSLQSGKETGEDLDA
FT                   GKETKKNTTNEKGDKSQNTQNTQNGKGTTSSGNKDKDINVGSKGKVVPRLQKITRKMNL
FT                   PMVGGKIILNLDHLLEYKPNQVDLFNTRATKTQFTAWYNAVKAEYELEDEQMGVVMNGF
FT                   MVWCIDNGTSPDVNGVWVMMDGEEQVEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMR
FT                   NSEGPYMPRYGLLRNLRDRDLARYAFDFYEVTSKTPNRAREALAQMKAAALTGVSNKLF
FT                   GLDGNISTTAENTERHTARDVNQNMHTLLGMGPPQ"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT   mat_peptide     634..1479
FT                   /product="coat protein"
FT   3'UTR           1483..1733
XX
SQ   Sequence 1733 BP; 546 A; 295 C; 437 G; 455 T; 0 other;
     gggaataata gtgggcagcc atccacagtt gtggacaata ccttaatggt ggttattgct        60
     atgtattact catgctgtaa acaaggatgg tcagaaagag aaattcagga gagactggtg       120
     ttctttgcta atggggatga catagttctg gcagttaatg ataaggatat atggttatat       180
     gacactctta gcacctcgtt tgctgagctt ggtcttaatt ataattttga tgagcgaacg       240
     aggaagagag aagaattatg gtttatgaca cataaagccg tactacttga tggggtttat       300
     attccaaagc ttgagccgga gcggatagtc tccatcctag aatgggatag aagcaaggag       360
     ctcatgcacc gaactgaagc aatttgtgct gcaatgattg aagcatgggg atacacagag       420
     ctgctacagg aaattcgcaa gttctacttg tggctcctaa gcaaagatga atttaaggaa       480
     ctcgctgcat ctggaaaagc accgtatatt gcggagatag ctttgagaaa gctttacaca       540
     gatgttaatg cgcatgaaag tgagctgcaa agatatcttg aggttctaga tctcagccat       600
     gcaagtaatt gttgcgaatc ggtctccttg caatcaggga aggagacagg cgaagatttg       660
     gatgcaggta aagaaacaaa gaaaaacacc accaatgaaa aaggagacaa gtcccaaaac       720
     acacagaaca ctcaaaatgg aaaagggaca acaagttctg gaaataagga caaggatata       780
     aatgttggat caaaaggaaa agttgttcca cgtctgcaga agatcacgag gaaaatgaat       840
     ctcccgatgg ttggtgggaa aatcattctc aatctggatc atttgctcga gtacaaacct       900
     aatcaggttg atttattcaa tactcgggca acaaaaacac agtttacagc atggtataat       960
     gcagtcaagg ctgaatatga actagaggat gagcagatgg gtgtggtcat gaatggcttc      1020
     atggtttggt gtatagataa tggcacatcc ccggatgtta atggggtgtg ggtaatgatg      1080
     gatggagagg agcaggttga gtatccgctg aagcctattg ttgaaaatgc aaaaccaact      1140
     ttaaggcaaa tcatgcatca tttctcagat gcagcggaag cttatattga aatgagaaac      1200
     tctgaaggtc cgtatatgcc tagatacgga ctgctgagaa atttgagaga cagagatttg      1260
     gcacgctatg cttttgattt ctatgaagta acttccaaga caccaaatag agcaagagag      1320
     gcgctagcgc aaatgaaggc tgcagctctc acgggagtta gcaacaagtt gtttggactt      1380
     gatggtaata tctcaaccac tgccgaaaat actgagaggc acactgcgag ggatgtgaat      1440
     caaaacatgc acactctttt ggggatgggc ccaccacagt aaaggctagg tgaactagcc      1500
     acagttaaca tttcgggtcg ctttatagct ttctataata ttatattgca cttgttttag      1560
     gtacagtgtg attgtatcac ctttgttgta cttatgtttg gtgtggcttg accaccctga      1620
     tgtgctttat attatagttt atgaatggca aggagaacta ttgcaatgct ggagccattc      1680
     gcagagtgat ttcatcacga gagtggccga agtacggcaa tatttgttgt cct             1733
//