ID   AJ628752; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AJ628752;
XX
DT   22-JAN-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial polyprotein gene for NIb and coat proteins,
DE   genomic RNA, isolate SY1
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Soybean mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1733
RA   Adams M.J.;
RT   ;
RL   Submitted (25-FEB-2004) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [3]
RX   DOI; 10.1007/s00705-004-0390-z.
RX   PUBMED; 15449140.
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Further molecular characterisation of potyviruses infecting aroid plants
RT   for medicinal use in China";
RL   Arch. Virol. 150(1):125-135(2005).
XX
DR   MD5; caf647292a66cdaa1d6133e9426b0a5e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Soybean mosaic virus"
FT                   /host="Pinellia ternata"
FT                   /strain="P"
FT                   /isolate="SY1"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Jiangsu:Sheyang county"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..1482
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5K4D4"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q5K4D4"
FT                   /protein_id="CAF32242.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVIAMYYSCCKQGWSEKEIQEKLVFFANG
FT                   DDIILAVNDKDVWLYDTLSTSFAELGLNYNFDERTRKREELWFMSHKAILIDGVYIPKL
FT                   EPERIVSILEWDRSKELMHRTEAICAAMIEAWGYTELLQEIRKFHLWLLSKDEFKELAA
FT                   SGKAPYIAETALRKLYTDVNAQESELQRYLEVLDFNHAGDCCESVSLQSEKETGEDLDA
FT                   GKETKKNTNNEEGDKSQSTQSTQSGKGTTSTGNKDKDINVGSKGKVVPRLQKITRKMNL
FT                   PMVGGKIILNLDHLLEYKPNQVDLFNTRATKTQFTAWYNAVKAEYGLEDGQMSVVMNGF
FT                   MVWCIDNGTSPDINGMWVMMDGEEQVEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMR
FT                   NSEGPYMPRYGLLRNLRDRDLARYAFDFYEVTSKTPNRAREALAQMKAAALTGVNNKLF
FT                   GLDGNISTTAENTERHTARDVNQNMHTLLGMGPPQ"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT   mat_peptide     634..1479
FT                   /product="coat protein"
FT   3'UTR           1483..1733
XX
SQ   Sequence 1733 BP; 555 A; 300 C; 428 G; 450 T; 0 other;
     ggcaacaata gcgggcaacc atctacagtt gtagacaaca ccttgatggt ggttattgct        60
     atgtattatt catgctgcaa acaaggatgg tcagagaaag aaattcagga gaaattggtg       120
     ttctttgcta atggggatga cataattctg gcagtcaatg acaaggatgt gtggctgtat       180
     gacactctta gcacctcgtt cgctgagctt ggtcttaatt ataattttga cgagcgaacg       240
     aggaagagag aagaactgtg gtttatgtca cacaaagcca tactaattga tggggtttat       300
     atcccgaagc ttgagccaga acggatagtc tccattttag aatgggatag aagcaaggag       360
     cttatgcatc gaaccgaagc aatttgtgct gcaatgattg aagcatgggg atacacagaa       420
     ctgttgcagg aaattcgcaa gtttcacttg tggctcctaa gcaaagatga attcaaggag       480
     cttgctgcat ctgggaaagc accgtatatt gcagagacag ctttgagaaa gctttacaca       540
     gatgtgaatg cacaagaaag cgagctgcaa agataccttg aagttctaga ttttaaccat       600
     gcaggtgatt gttgcgaatc ggtctctctg caatcagaaa aagagacagg tgaggacttg       660
     gatgcaggca aagaaacaaa gaaaaacacc aacaatgaag aaggagataa gtctcagagc       720
     acacaaagca ctcaaagtgg aaaaggaaca acaagtactg ggaacaagga taaggatata       780
     aatgttggat ccaaaggaaa ggttgttcca cgcctgcaaa agatcacgag gaaaatgaat       840
     ctcccaatgg ttggtggaaa aatcattctt aacctggatc atttgcttga gtacaaacct       900
     aatcaggttg atttgtttaa cactcgggca acaaagacac agtttacagc atggtataat       960
     gcagtcaagg ctgagtatgg actagaggat ggacagatga gtgtggtcat gaatggcttc      1020
     atggtttggt gtatagataa tggcacatcc ccggatatta atggaatgtg ggtaatgatg      1080
     gatggagaag aacaagttga gtatccgctg aagcctattg ttgaaaatgc aaaaccaact      1140
     ttaaggcaaa tcatgcatca tttttcagat gcagcggaag cttatattga aatgagaaac      1200
     tctgaaggtc cgtatatgcc tagatacgga ctactgagga atttgagaga cagagatctg      1260
     gcacgctatg cttttgattt ctatgaagtg acttccaaga caccaaatag agcaagagaa      1320
     gcattagcgc aaatgaaggc tgcagctctc acgggagtta acaacaagtt gtttggactt      1380
     gatggcaaca tctcaaccac tgccgaaaat actgagaggc acactgcgag ggacgtgaat      1440
     caaaacatgc acactctttt gggcatgggt ccaccacagt aaaggttagg tcaactggcc      1500
     acagttagca tttcgggtcg ctttatagtt ttctataata taatattgca cttattttaa      1560
     gtacagtgtg attgtatcac ctttgttgta cttatactta gtgtggctta gccaccttat      1620
     tgtgctttat attatagttt atgaatggca gggagaacta ttgcaatgct ggagccattc      1680
     gtggagtgat ttcatcacga gagtggccga agtacggcaa tatttgttgt cct             1733
//