ID   AJ628751; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AJ628751;
XX
DT   22-JAN-2005 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Soybean mosaic virus partial polyprotein gene for NIb and coat proteins,
DE   genomic RNA, isolate SH
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Soybean mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1733
RA   Adams M.J.;
RT   ;
RL   Submitted (25-FEB-2004) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [3]
RX   DOI; 10.1007/s00705-004-0390-z.
RX   PUBMED; 15449140.
RA   Shi Y.H., Hong X.Y., Chen J., Adams M.J., Zheng H.Y., Lin L., Qing B.X.,
RA   Chen J.;
RT   "Further molecular characterisation of potyviruses infecting aroid plants
RT   for medicinal use in China";
RL   Arch. Virol. 150(1):125-135(2005).
XX
DR   MD5; 15de7494de759df27e55d53e83165b92.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Soybean mosaic virus"
FT                   /host="Pinellia ternata"
FT                   /strain="P"
FT                   /isolate="SH"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shanghai"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..1482
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5K4D5"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q5K4D5"
FT                   /protein_id="CAF32241.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVIAMYYSCCKQGWSEKEIQKKLVFFANG
FT                   DDIILAVSDKDVWLYDTLSTSFAELGLNYNFNERTRKREELWFMSHKAVLIDGVYIPKL
FT                   EPERIVSILEWDRSKELMHRTEAICAAMIEAWGYTELLQEIRKFYLWLLSKDEFKELAA
FT                   SGKAPYIAETALRKLYTDVNTQESELQRYLEVLDFSHADNCCESVSLQSGKETGEDLDA
FT                   GKETKKNTTNEKGDKSQNTQNTQSGKGTTSSGAKDKDINVGSKGKVVPRLQKITRKMNL
FT                   PMVGGKIILNLDHLLEYKPNQVDLFNTRATKTQFTAWYNAVKAEYELEGEQMGVVMNGF
FT                   MVWCIDNGTSPDVNGVWVMMDGEEQVEYPLKPIVENAKPTLRQIVHHFSDAAEAYIEMR
FT                   NSEGPYMPRYGLLRNLRDRDLARYAFDFYEVTSKTPNRAREALAQMKAAALTGVNNKLF
FT                   GLDGNISTNAENTERHTARDVNQNMHTLLGMGPPQ"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT   mat_peptide     634..1479
FT                   /product="coat protein"
FT   3'UTR           1483..1733
XX
SQ   Sequence 1733 BP; 551 A; 313 C; 432 G; 437 T; 0 other;
     gggaacaaca gtgggcaacc atctacagtt gtagacaaca ccttgatggt ggttattgct        60
     atgtattact cgtgctgcaa acaaggatgg tcggaaaaag aaattcagaa gaagttggtg       120
     ttctttgcta atggggatga cataatttta gcagttagtg ataaggatgt atggctgtat       180
     gacactctta gcacctcgtt tgctgaactt ggcctcaatt acaattttaa tgagcgaacg       240
     aggaagagag aggaactatg gtttatgtca cataaagccg tactaattga tggggtttat       300
     attccaaagc ttgagccaga acgaatagtc tccatcttag aatgggacag aagcaaggag       360
     cttatgcacc ggaccgaagc aatttgtgcc gcaatgattg aagcatgggg gtacacagaa       420
     ctgctgcagg aaattcgcaa gttctacttg tggctcctca gcaaagatga atttaaggaa       480
     ctcgctgcat caggaaaagc accgtatatt gcggagacag ctttaaggaa actttataca       540
     gatgttaata cacaggaaag cgagttgcaa agatacctcg aagttctaga tttcagccat       600
     gcggataatt gttgcgaatc ggtctccttg caatcaggga aagaaacagg tgaagatttg       660
     gatgcaggta aagaaacaaa gaaaaacacc accaatgaga aaggagacaa gtcccagaat       720
     acacaaaaca ctcaaagtgg aaaaggaaca acaagctctg gagctaagga caaggatata       780
     aatgttggat caaaaggaaa ggttgttcca cgcctgcaaa agatcacgag gaaaatgaat       840
     ctcccgatgg ttggtgggaa aatcattctt aacttggatc atttgcttga gtacaaacct       900
     aatcaggttg atttattcaa cactcgggca acgaagacac agttcacagc atggtataat       960
     gcagtcaagg ctgagtatga actagagggt gagcagatgg gtgtggtcat gaatggcttc      1020
     atggtttggt gtatagataa tggcacatcc ccagatgtca atggggtgtg ggtaatgatg      1080
     gacggagagg aacaagtcga gtatccgctg aagcctattg ttgaaaatgc taaaccaact      1140
     ttaaggcaaa tcgtgcatca cttttcagac gcagcggaag cttatattga aatgagaaac      1200
     tctgaaggtc cgtatatgcc tagatacgga ctattgagga atctgagaga cagagatctg      1260
     gcacgctatg cttttgattt ctatgaagtg acttccaaga caccaaatag agcaagggaa      1320
     gcattagcgc aaatgaaggc tgcagctctc acgggagtta acaacaagtt gtttggactt      1380
     gatggcaata tctcaaccaa tgccgaaaat actgagaggc acactgcgag ggacgtaaat      1440
     caaaacatgc acacccttct gggcatgggt ccaccacagt aaaggctagg tgaactggtc      1500
     acagttagca tttcgggtcg ctttatagtt ttctataata ctatgttgca cttactttaa      1560
     gtatagcgtg actgtgtcac ctttgttata ctaatgctta gtgtggctta gccaccctag      1620
     tgtactttgt attatagttt atgaatggca aggagaacta ttgcaatgct ggagctattc      1680
     gcagagtgat tccatcacga gagtggccga agtacggcaa tatttgttgt cct             1733
//