ID AJ627904; SV 1; circular; genomic DNA; STD; VRL; 2728 BP. XX AC AJ627904; XX DT 18-FEB-2004 (Rel. 78, Created) DT 18-FEB-2004 (Rel. 78, Last updated, Version 1) XX DE Horsegram yellow mosaic virus ac4 gene, av1 gene, ac1 gene, ac2 gene, ac3 DE gene and av2 gene XX KW ac1 gene; AC1 protein; ac2 gene; AC2 protein; ac3 gene; AC3 protein; KW ac4 gene; AC4 protein; av1 gene; AV1 protein; av2 gene; AV2 protein. XX OS Horsegram yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2728 RA Usha R.; RT ; RL Submitted (17-FEB-2004) to the INSDC. RL Usha R., Plant Biotechnology, Madurai Kamaraj University, School of RL Biotechnology, Madurai, Tamil Nadu, 625021, INDIA. XX RN [2] RA Barnabas A.D., Girish K.R., Usha R.; RT "Molecular characterization of Horsegram yellow mosaic virus, a bipartite RT begomovirus, from India"; RL Unpublished. XX DR MD5; 464404d378a8c135bcbf5191bc13f8da. XX FH Key Location/Qualifiers FH FT source 1..2728 FT /organism="Horsegram yellow mosaic virus" FT /host="Macrotyloma uniflorum (Lam.) Verdc." FT /isolate="Coimbatore" FT /mol_type="genomic DNA" FT /country="India:Tamil Nadu" FT /isolation_source="infected leaves" FT /note="DNA A" FT /db_xref="taxon:263793" FT CDS 144..491 FT /transl_table=1 FT /gene="av2" FT /product="AV2 protein" FT /function="pre-coat" FT /db_xref="GOA:Q701Q2" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:Q701Q2" FT /protein_id="CAF29509.1" FT /translation="MWDPLLNDFPKTVHGFRMLAIKYLQQVQENYSTNSVGFLYITELI FT QVLRIRKHAKAELRYRLLYPGIQCSSETDLRHPPGATCFCGKCSCQREKTSVDQPSHVE FT ETEILSVVSLS" FT CDS 301..1074 FT /transl_table=1 FT /gene="av1" FT /product="AV1 protein" FT /function="coat protein" FT /db_xref="GOA:Q701Q1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q701Q1" FT /protein_id="CAF29510.1" FT /translation="MPKRNYDTAFSTPGSSVRRRLTYDTPLALPASAGSAPASVRRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEARHDISHVGKVICVTDVTRGSGLTH FT RVGKRFCVKSIFITGKIWMDENIKTKNHTNTVMFRLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDLRDRYQVVRKFHATVTGGQYACKEQAIISRFYRVNNHVVYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSISN" FT CDS complement(1071..1475) FT /transl_table=1 FT /gene="ac3" FT /product="AC3 protein" FT /function="replication enhancer" FT /db_xref="GOA:Q701Q0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q701Q0" FT /protein_id="CAF29511.1" FT /translation="MDFRTGDNITAAQLRNGVYIWEVRNPLSFKILQHRPMGAGSRMIV FT TQIRLMFNHGLKKALQMHKCFLDLKLYHYMTTTSGMILSIFRNQLFRYLNNLGVISLGN FT VLNGASHILYEKLHLVEDVSFTHNVQYKLY" FT CDS complement(1216..1623) FT /transl_table=1 FT /gene="ac2" FT /product="AC2 protein" FT /function="transcriptional activator" FT /db_xref="GOA:Q701P9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q701P9" FT /protein_id="CAF29512.1" FT /translation="MRNSTPSKNHSSPPSIKAQHRVAKKRAIRRSRIDLTCGCSYYIHI FT NCRNYGFSHRGQHHCSSTQEWRLYLGGAKSPLFQDPSTSSNGSRVPNDRDPNPPNVQPR FT TEESIADAQMLPRPEAVPLYDDDFWDDIINF" FT CDS complement(1523..2608) FT /transl_table=1 FT /gene="ac1" FT /product="AC1 protein" FT /function="replication initiation" FT /db_xref="GOA:Q701P8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q701P8" FT /protein_id="CAF29513.1" FT /translation="MPRERRFAINAKNYFLTYPRCPLTKEDTLEQLLDLSTPVNKKIHS FT HLPRAYENGEPHLHVLLQFEGKFHTRNQRFFDLVSSTRSTHFHPNIQAAQSCSDVKQYM FT EKDGDVLDHGTFQIDGRSARGGKQSANDAYAEALNCGSKSQALDILKEKAPKDYILQFH FT NLNCNLNKIFISPIQAYVSPYSIDTFSRVPEYISSWASENVRSRCAPERPISIVIEGDS FT RTGKTMWARALGPHNYLCGHLDLNDKIFSNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQ FT SNVKYGKPTHIKGGIPTIFLCNPGPKSSYKEYLDEADNASLKVWASKNAEFYTLKEPLF FT SSVDQSATQGCQEASNSTLSN" FT CDS complement(2158..2457) FT /transl_table=1 FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q701P7" FT /protein_id="CAF29514.1" FT /translation="MRMENLISMFCCNSKANSTHVTKGSSTWYPQPGQHISIRTFRQLK FT AAQMLSNTWRKTETSLIMEPSKSMEDRLEEVNSLQTTRMPRHSTVDPNHRPSIY" XX SQ Sequence 2728 BP; 704 A; 579 C; 613 G; 832 T; 0 other; acctgagtgc cccgcgatcg ttccactctg cttttgcttt tggaccgctt tacttttagt 60 cgttcaatga gaagcgctcc tcagcactac gataattcaa atttgaatta taaagctaat 120 agccacgttg catcgcacta accatgtggg atccattgtt gaacgacttt cccaaaacag 180 ttcatggttt ccgtatgctt gcaattaagt acttgcagca agttcaagag aattattcca 240 ctaattctgt tggttttttg tatatcacag agctaataca ggtattacgc attcggaaac 300 atgccaaagc ggaactacga taccgccttc tctaccccgg gatccagtgt tcgtcggaga 360 ctgacttacg acacccccct ggcgctacct gcttctgcgg gaagtgctcc tgccagcgtg 420 agaagacgtc ggtggaccaa ccgtcccatg tggaggaaac cgagatttta tcggttgtat 480 cgctctcctg atgtcccacg tggttgtgaa ggaccgtgta aggtccaatc atttgaggcg 540 agacatgaca tctcgcatgt gggcaaagtc atttgtgtca cggatgtgac tcgtggtagt 600 ggtctcactc atcgtgtcgg taaacgattt tgtgttaagt ccatttttat tactggaaag 660 atttggatgg acgaaaacat caagaccaag aatcacacta acactgtgat gttcagattg 720 gttcgtgata ggcgtccttt tggaacgccc caggactttg gtcaagtttt caacatgtat 780 gataatgaac ccagtactgc cactgtgaag aacgatcttc gtgatcgtta tcaggtcgtg 840 cgtaagtttc atgccaccgt gactggtggc cagtatgcgt gcaaggagca agctataatt 900 agccgatttt atcgtgttaa taatcatgtt gtttacaacc atcaggaagc tgcgaagtat 960 gacaatcata ctgagaacgc tttgttattg tatatggcat gtactcatgc ttctaatcct 1020 gtgtatgcaa cgcttaagat tcggatctat ttttacgatt cgatatcaaa ttaataaagc 1080 ttgtattgaa cattatgcgt aaagcttaca tcctccacca ggtggagttt ttcatacagg 1140 atatgtgagg cgccatttaa tacattgcct aagctaatga cgcctaaatt atttaaatat 1200 ctaaataatt ggttcctaaa aattgataat atcatcccag aagtcgtcgt catatagtgg 1260 tacagcttca ggtcgaggaa gcatttgtgc atctgcaatg ctttcttcag tccgtggttg 1320 aacattaggc ggatttgggt cacgatcatt cgggaccctg ctcccattgg acgatgttga 1380 aggatcttga aagagagggg atttcgcacc tcccagatat agacgccatt cctgagttga 1440 gctgcagtga tgttgtcccc ggtgcgaaaa tccatagttg cgacagttga tgtgaatgta 1500 atagctacac ccacaggtta agtcaattcg agagcgtcga attgctcgct tcttggcaac 1560 cctgtgttgc gctttgatcg acggaggaga agagtggttc tttgagggtg tagaattccg 1620 cattttttga agcccacacc tttagcgacg cattatcagc ttcgtccaag tactctttat 1680 aagaggattt gggacctggg ttacagagaa agatggtggg gattccacct ttaatgtgtg 1740 tgggctttcc gtattttaca tttgactgcc agtctctttg cgcgcccatg aattctttga 1800 aatgtttcaa ataatgtgga tcaacgtcat cgatgacgtt ataccatgcc tcgttagaga 1860 aaatcttatc gttcagatcc aaatggccgc aaagataatt atgaggaccc aatgctcttg 1920 cccacatggt tttacccgtc cgactatcac cttcaatcac tatacttatg ggtctctccg 1980 gcgcgcagcg ggatcttaca ttttctgaag cccatgaaga aatatattct gggactctac 2040 taaatgtatc tatactataa ggcgacacat atgcctgaat aggcgaaatg aaaatcttat 2100 tcaaattaca atttaaatta tgaaattgta aaatataatc ttttggagcc ttctctttca 2160 atatatcgag ggcctgtgat ttggatccac agttgagtgc ctcggcatac gcgtcgtttg 2220 cagactgttt acctcctcta gccgatcttc catcgatttg gaaggttcca tgatcaagga 2280 cgtctccgtc tttctccatg tattgcttaa catctgagca gctttgagct gcctgaatgt 2340 tcggatggaa atgtgttgac ctggttgagg ataccaggtc gaagaacctt tggttacgtg 2400 tgtggaattt gccttcgaat tgcagcagaa catggagatg aggttctcca ttctcataag 2460 ctctcggcag atgcgaatga atcttcttgt taactggtgt tgacaaatct aatagttgct 2520 ccagtgtgtc ctctttagtt agaggacagc gaggatatgt aaggaaatag tttttagcgt 2580 ttatagcaaa acgacgctct cttggcattt ttaaagtcgt ttttgtatcg gttgtccacc 2640 gattctcatt tactcctgtc aatcggtgaa tggtgacgca tatatagtag agctactaat 2700 cccccaaggg gcactcagca ataatatt 2728 //