ID AJ620188; SV 1; circular; genomic DNA; STD; VRL; 2702 BP. XX AC AJ620188; XX DT 08-JAN-2004 (Rel. 78, Created) DT 06-DEC-2006 (Rel. 90, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus - [Pakistan:Solanum:1997] segment B, DE complete sequence XX KW BC1 gene; BV1 gene; complete genome; movement protein; KW nuclear shuttle protein. XX OS Tomato leaf curl New Delhi virus [Pakistan:Solanum:1997] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2702 RA Briddon R.W.; RT ; RL Submitted (04-JAN-2004) to the INSDC. RL Briddon R.W., Department of Disease and Stress Biology, John Innes Centre, RL Colney Lane, Norwich, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Briddon R.W.; RT "Diversity of begomoviruses in Pakistan"; RL Unpublished. XX DR MD5; b1732d11524a3171e090925dfac0acc8. DR EuropePMC; PMC3125359; 21676270. XX CC Related entry AJ620187 XX FH Key Location/Qualifiers FH FT source 1..2702 FT /organism="Tomato leaf curl New Delhi virus FT [Pakistan:Solanum:1997]" FT /segment="B" FT /host="Solanum nigrum:leaf" FT /mol_type="genomic DNA" FT /country="Pakistan" FT /clone="H42-5" FT /db_xref="taxon:407834" FT CDS 439..1125 FT /transl_table=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /function="intracellular movement" FT /db_xref="GOA:Q705I3" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:Q705I3" FT /protein_id="CAF04473.1" FT /translation="MAFPSPYLTPRRSGYLFNRTYNGNKSFHLWKSRKSQNWKRYRSTQ FT FVARSPTELFGDPISKQYTRKEICETHEGSEYVLHNNRYMTSYVTYPSKTRTGTNNRVR FT SYIKLKSLNISGTFAVRKSDLMTEVVQTNGLYGVMSLVVVRDKSPKIYSATQPLIPFVE FT LFGCVNSCRGSLKVAERHHERFVLLNQTSIVVNTPHSNAIKKFCIRNCIPRTLHNLGYV FT QGRRRR" FT CDS complement(1304..2149) FT /transl_table=1 FT /gene="BC1" FT /product="movement protein" FT /function="intercellular movement" FT /db_xref="GOA:Q705I2" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q705I2" FT /protein_id="CAF04474.1" FT /translation="MSIGNDGMGMGVGGYIQSERLEYALTNDATEITLSFPSMFEQKIS FT QLRNRCMKIDHVVLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSSFFSLKDKNPWRVEYRVENANVVNGVHFCKMLGKLKLSSAKNSTAVEFRPPKIEIQ FT TKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPYMAIGPNESWASRSEIGHS FT SVTSRPYKNLSGLDDSAIDPGPSASHAGSITRDEITDIITKTVEQCIRSNVNAPLSKGV FT " XX SQ Sequence 2702 BP; 774 A; 596 C; 491 G; 841 T; 0 other; ccgaatggcc gcgaaaattt tttcccctca tcctgaccgt tgtttcgtaa tcattgcacg 60 ccgttatccg cccgatttgc aacacgtgtc tcccattaac agactttatg caaataaatg 120 tctgatatgg tgttcacaat gctaaagtgg tccccatata tattttcgta catcatttta 180 gtgcgtttgt ggtccccccg cagaacatat tgtctgaatg ttaaaattta gtgcattctt 240 tcttatatca attttgatcg gtcgagatca aaattattat tgttctatca tgccagccgt 300 ccgatcttat gatatttgct ttaattcaaa caatacttgt ttgaatttta tacccaccgt 360 acaatattaa tatataacct gatacatata tgacaataca tagtgccgtc gttgccacac 420 atttcttatc tctcttaaat ggcttttcct tctccttatc tcaccccccg ccgttccggt 480 tacctattca acagaactta caacggaaac aagagtttcc atttgtggaa gtcccggaag 540 tcccaaaatt ggaagcgcta tcgcagtacc cagttcgtcg cacgttctcc tacggaactg 600 tttggggatc caatctctaa acaatatacg cgtaaggaaa tctgtgaaac acacgaagga 660 tcagagtatg ttctccacaa caatcgttac atgacgtcat atgtcacata cccatccaaa 720 acaagaactg gaacgaacaa ccgtgttcgt tcctatatta agctaaagag tctgaacata 780 tctgggacat ttgctgttcg taagtccgat ctgatgacgg aagtggttca aacaaatgga 840 ctctacggag tgatgtctct agttgtagtc cgcgataaat ctccaaagat ttattctgcg 900 acccaaccgt taataccatt tgttgagctg tttggttgtg ttaattcctg caggggaagt 960 ctgaaagtgg cagaacgcca ccatgaacgc tttgtactac tgaatcaaac atccatcgtc 1020 gtcaatactc cacattctaa cgctatcaag aaattctgca ttcggaactg catcccacga 1080 acgttacaca acttgggtta cgttcaagga cgaagaagaa gatagctgta ctggactata 1140 ctcaaacaca ctccgaaatg caattattat atattatgtt tggttaagcg atgtatcatc 1200 acaagtcgat atctatagca atgtaattct taattacatt ggataaaaaa taaaatttgc 1260 actccaacaa tttatttatg aataaatttg acaacaaatt tatttaaacg ccttttgata 1320 gtggagcatt tacatttgat cttatacatt gttctactgt ctttgttatt atatccgtaa 1380 tctcgtccct cgtaatactc cctgcatgtg aagccgacgg acctgggtcg attgccgaat 1440 cgtccaatcc gctcaggttt ttgtatggtc tactggtaac ggacgaatgt ccgatctccg 1500 atctgcttgc ccatgactcg ttcggaccta tagccatata gggtacccgc aacgatcttg 1560 agctatgtcc catcaatctt gaaccatcca caagtcgtct tgtttgtggt ttggaaccta 1620 ctgaccagaa atcgatgtcg ttcacggtga actctttggt ttgtatctct atctttggtg 1680 gtcggaattc gacggcagtt gaattttttg ccgacgacag cttcaatttt cctagcatct 1740 tacagaagtg caccccattc acgacgtttg cgttctctac tctgtattca actctccaag 1800 gatttttatc cttgagagag aagaatgagg aagagtagta gtgtaggtta caattgcatt 1860 tgatcggaat cgtgaattct gcctgttttg tgtctccctc cgtcaatctc atgtcgtgta 1920 tctctataac gacatgacca acagcattaa ttggaacctg actgcgatat tccagtacta 1980 cgtgatctat tttcatgcat ctattcctca actggctaat cttttgttcg aacattgaag 2040 gaaatgacaa ggtgatctct gtagcatcat ttgtgagcgc atactcaagg cgctcagatt 2100 gtatataccc gcccactccc atacccatac catcatttcc tattgacatt ttggccgcgc 2160 agcggaacac acactgaaac acagaaggag ggactacgat cacagaaaac ccagaaaaag 2220 aagaagaaac cctagcaatt aaggaagttg ttttgcaaac aactgactaa catgccctta 2280 taattgtttt ccatgtgttg tctacgtcgt actaaataat ctcaaatgaa cggcacatat 2340 ttttcgacga aaaatgaaat gtgccattat atatatatgt atgtatttat ttgtatgcct 2400 ttacgaagcc caattgtata aaattgggct gcaaccagaa catatgaaaa agcccatgaa 2460 attggcccag catcgaagtc gttgtataaa acgacatcgg ttatgttctc atacgtcagc 2520 aaatgttaga gagaagttgc tctttctctc ttgtcgtttt gattcggcgt ccctcaactt 2580 atctatgtaa tgggtgtctg gagtcctata tataggtaag acaccatatg gcattattgt 2640 aattttgaaa aagaaaatta ctttaattca aattccctaa agcggccatt agtataatat 2700 ta 2702 //