ID AJ618958; SV 1; circular; genomic DNA; STD; VRL; 2799 BP. XX AC AJ618958; XX DT 17-DEC-2005 (Rel. 86, Created) DT 17-DEC-2005 (Rel. 86, Last updated, Version 1) XX DE East African cassava mosaic virus DNA A, clone 20-ug50a8 XX KW C1 gene; C2 gene; C3 gene; C4 gene; V1 gene; V2 gene; C4 protein; KW V2 protein; coat protein; replication enhancer protein; KW replication-associated protein; transciptional activator protein. XX OS East African cassava mosaic virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2799 RA Sserubombwe W.S.; RT ; RL Submitted (17-DEC-2003) to the INSDC. RL Sserubombwe W.S., Disease and Stress Biology, John Innes Centre, Colney RL Lane, Norwich,, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Sserubombwe W.S., Bull S.E., Briddon R.W., Stanley J.; RT "Diversity of cassava-infecting begomoviruses in Uganda"; RL Unpublished. XX DR MD5; d140605b343dfcff61ea8e5f9773aa25. XX FH Key Location/Qualifiers FH FT source 1..2799 FT /organism="East African cassava mosaic virus" FT /segment="DNA A" FT /mol_type="genomic DNA" FT /country="Uganda:Mpigi" FT /isolation_source="leaf" FT /clone="20-ug50a8" FT /db_xref="taxon:62079" FT CDS 172..528 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:A0A3S5ZP69" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0A3S5ZP69" FT /protein_id="CAF02053.1" FT /translation="MWDPLVNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKNYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT ETQDVQNVSKPRCP" FT CDS 332..1105 FT /gene="V1" FT /product="coat protein" FT /function="encapsidation, insect transmission" FT /db_xref="GOA:Q2UZP0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q2UZP0" FT /protein_id="CAF02054.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNNVVVYLLRDRRPYGNAPQDFGQIFNMFDNE FT PSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYKLNHHVTYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1102..1506) FT /gene="C3" FT /product="replication enhancer protein" FT /function="enhances viral DNA replication" FT /db_xref="GOA:Q2UZN9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2UZN9" FT /protein_id="CAF02055.1" FT /translation="MDSRTGELITAPQARNGVFTWDITNPLYFEITDHDKRPGNLNHDI FT ITLQIRFNHNLRKALGTHKCFLNFKIWTTLRPPTGRFLRVFRYQVLKYLDMIGVISINT FT VLQAVDHVVYDVLLNTLQVTEQHAIKFNLY" FT CDS complement(1247..1654) FT /gene="C2" FT /product="transciptional activator protein" FT /function="activation of virion strand transcription" FT /db_xref="GOA:Q2UZN8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2UZN8" FT /protein_id="CAF02056.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHRPRQEAREPEPRHHHTPDSVQPQ FT PSEGIGDSQVFSQLQDLDDLTASDWSFFKSI" FT CDS complement(1563..2642) FT /gene="C1" FT /product="replication-associated protein" FT /function="initian of viral DNA replication" FT /db_xref="GOA:Q2UZN7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2UZN7" FT /protein_id="CAF02057.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLQALSYPTDIKFIR FT VCRELHQDGVPHLHVLIQLEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDAGLFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEDIEVWVSDNICSPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDVEKNQSLKAWALKNATFITLHEPL FT FSSAHQSPTPHSEDQGRQT" FT CDS complement(2252..2485) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2UZN6" FT /protein_id="CAF02058.1" FT /translation="MGCLISMFSSNSKASSNVPTRDSSISFPHPDQHISIRTFRELNHR FT PMSKLTLKREGNFLTLDFSKSMPEVQGGRANI" XX SQ Sequence 2799 BP; 732 A; 551 C; 735 G; 781 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gaccccataa tgaccgtgcc cgttaaagaa 60 agtggtccct gcgcacttgt tttggtcggc cagtcatatt cacgcgtgaa agtctaaata 120 tttgttgttt gtctttatag acttcgtcgc gaagtagtag agcgcgtcaa catgtgggat 180 ccattggtga acgattttcc cgaaaccgtt cacggtttcc gttctatgct tgctgttaaa 240 tacctgttac atctggaaca ggaatacgat cgcggtactg tcggggctga gtatatacgg 300 gatctaatag gggttctacg gtgtaagaat tatgtcgaag cgaccaggag atataataat 360 ctcaacaccc gtatccaagg tgcggaggag gctgaacttc gacagcccat acacgaaccg 420 tgttgttgcc cccactgtcc gcgtcaccag aagcaaaata tgggccaaca ggcccatgta 480 tcggaaaccc aagatgtaca gaatgtatcg aagcccagat gtccctaagg gctgtgaagg 540 cccatgtaag gtccagtcgt ttgagcagag ggatgatgtg aagcaccttg gtatctgtaa 600 ggtgattagt gatgtgacgc gtgggcctgg gctgacacac agggtcggaa agaggttttg 660 tatcaagtcc atttacattc ttggtaagat ctggatggat gaaaatatta agaagcagaa 720 tcacactaat aatgtggtgg tttacctgct tagggataga aggccgtatg gcaatgcgcc 780 ccaagacttt gggcagatat ttaacatgtt tgataatgag cccagtactg caacaattaa 840 gaacgatttg agggataggt ttcaggtgtt gaggaaattt catgccacgg ttgttggtgg 900 tccatctggc atgaaggagc aggcgttggt gaaaaggttt tacaagctga atcatcacgt 960 gacatataat catcaggagg cagggaagta tgagaatcac acagagaatg cgttgttatt 1020 gtatatggca tgtacacatg cctcgaatcc tgtgtatgct acgctgaaaa tacgcatcta 1080 tttttatgat gcagtgacaa attaataaag gttgaatttt attgcatgtt gctccgtaac 1140 ttggagtgtg tttagtaata catcgtacac aacatgatca acagcttgaa ggacggtgtt 1200 aatggaaata acgcctatca tatctaaata cttgagcact tgatatctaa atactcttaa 1260 aaaacgacca gtcggaggcc gtaaggtcgt ccagatcttg aagttgagaa aacacttgtg 1320 agtccccaat gccttccgaa ggttgtggtt gaaccgaatc tggagtgtga tgatgtcgtg 1380 gttcaggttc cctggcctct tgtcgtggtc ggtgatttcg aaatagaggg gatttgttat 1440 gtcccaggta aaaacgccat tccttgcttg aggcgcagtg atgagttccc ctgtgcgaga 1500 atccatggtt gatgcagtcg atatggagat agaacgagca gccgcattcg aggtctaccc 1560 gcctacgtct gacggccctg gtcttcgctg tgcggtgttg gactttgatg ggcactagag 1620 aacaatggct cgtggagggt gatgaaggtg gcattcttta aagcccaggc tttaagggat 1680 tggttctttt ccacgtccag aaactcttta tatgatgatg ttggtcctgg attgcagagg 1740 aagatagtgg gaatgccgcc tttaatttga attggcttcc cgtattttgt attgctttgc 1800 cagtctcttt gggcccccat gaattctttg aagtgtttga ggtagtgggg gtcgacgtca 1860 tcaatgacgt tgtaccaggc gtcgtttgaa tataccttgg gagacagatc caggtgtcca 1920 caaagataat tatggggtcc cagtgaacga gcccacattg ttttgccggt tcggctatca 1980 ccttctagaa caatactgat cggtctccat ggccgcgcag cgggactgca tatattgtcg 2040 gatacccata cctctatgtc ctctgggact tgtgtaaaag atgatgataa gaacggacta 2100 acgtaagttt gtggcggagc ctggaagatt ctatctgcgt tagcagatat gttatggaac 2160 tgtaaaaaaa aggactttgg atctttttct ttaataattt gaagagcctc ggatttagac 2220 gaagcattca acgcgtctgc atatacctga gctaaatgtt ggccctcccc ccttgcactt 2280 ctggcatcga cttggaaaag tccagcgtca agaaattccc ctcccttttc aatgtaagct 2340 ttgacatcgg acgatgattt agctccctga atgttcggat ggaaatgtgt tgatcgggat 2400 ggggaaatga gatcgaagaa tctcgggttg gtacattgga acttgccttc gagttggatg 2460 agaacatgga gatgaggcac cccatcctga tgtagttctc tgcaaaccct aatgaatttg 2520 atatccgtcg ggtacgaaag ggcttgtaat tgggaaaggg cctcctcttt tgttaatgag 2580 catcggggat atgttatgaa ataatttttg gcatttattt gaaaacgacc ggctcttggc 2640 atattggctg tcgttttgga tcgggggaca ctcaaaactc cagggaaacg gtggaatggg 2700 gggcaatata tatgatgtcc cccaatggca tatgtgtaaa taggtagact tccattcaaa 2760 atttgaattc cgaatattgg cggccatccg attaatatt 2799 //