ID AJ618956; SV 1; circular; genomic DNA; STD; VRL; 2799 BP. XX AC AJ618956; XX DT 17-DEC-2005 (Rel. 86, Created) DT 17-DEC-2005 (Rel. 86, Last updated, Version 1) XX DE East African cassava mosaic virus DNA A, clone 19-ug92b6 XX KW C1 gene; C2 gene; C3 gene; C4 gene; C4 protein; coat protein; KW replication enhancer protein; replication-associated protein; KW transciptional activator protein; V1 gene; V2 gene; V2 protein. XX OS East African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2799 RA Sserubombwe W.S.; RT ; RL Submitted (17-DEC-2003) to the INSDC. RL Sserubombwe W.S., Disease and Stress Biology, John Innes Centre, Colney RL Lane, Norwich,, NR4 7UH, UNITED KINGDOM. XX RN [2] RA Sserubombwe W.S., Bull S.E., Briddon R.W., Stanley J.; RT "Diversity of cassava-infecting begomoviruses in Uganda"; RL Unpublished. XX DR MD5; 7e7a0838a86a91f27fb555291f2aed64. XX FH Key Location/Qualifiers FH FT source 1..2799 FT /organism="East African cassava mosaic virus" FT /segment="DNA A" FT /mol_type="genomic DNA" FT /country="Uganda:Kaberamaido" FT /isolation_source="leaf" FT /clone="19-ug92b6" FT /db_xref="taxon:62079" FT CDS 172..528 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:A0A3S5ZP69" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:A0A3S5ZP69" FT /protein_id="CAF02041.1" FT /translation="MWDPLVNDFPETVHGFRSMLAVKYLLHLEQEYDRGTVGAEYIRDL FT IGVLRCKNYVEATRRYNNLNTRIQGAEEAELRQPIHEPCCCPHCPRHQKQNMGQQAHVS FT ETQDVQNVSKPRCP" FT CDS 332..1105 FT /gene="V1" FT /product="coat protein" FT /function="encapsidation, insect transmission" FT /db_xref="GOA:A0A3S5ZPD2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:A0A3S5ZPD2" FT /protein_id="CAF02042.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTHR FT VGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNAPQDFGQIFNMFDNE FT PSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYKLNHHVTYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1102..1506) FT /gene="C3" FT /product="replication enhancer protein" FT /function="enhances viral DNA replication" FT /db_xref="GOA:Q2UZQ1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2UZQ1" FT /protein_id="CAF02043.1" FT /translation="MDSRTGELITAPQARNGVFTWDITNPLYFETTDHDKRPGNMNHDI FT ITLQIRFNHNLRKALGIHKCFLNFKVWTTLRPQTGRFLRVFRYQVLMYLDMIGVISINT FT VLQAVDHVVYDVLLHTLQVTEQHAIKFNLY" FT CDS complement(1247..1654) FT /gene="C2" FT /product="transciptional activator protein" FT /function="activation of virion strand transcription" FT /db_xref="GOA:Q2UZP4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2UZP4" FT /protein_id="CAF02044.1" FT /translation="MPPSSPSTSHCSLVPIKVQHRTAKTRAVRRRRVDLECGCSFYLHI FT DCINHGFSHRGTHHCASSKEWRFYLGHNKSPLFRNHRPRQEAREHEPRHHHTPDTVQPQ FT PSEGIGDSQVFSQLQGLDDLTASDWSFLKSI" FT CDS complement(1563..2642) FT /gene="C1" FT /product="replication-associated protein" FT /function="initian of viral DNA replication" FT /db_xref="GOA:Q2UZP9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q2UZP9" FT /protein_id="CAF02045.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLTKEEALSQLQALSYPTDIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKEGEFLDAGLFQVDARSARGEGQHLAQVYADALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEDIEVWVSENICSPAARPWRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNQSLKAWALKNATFITLHEPL FT LSSAHQSPTPHSEDQGRQT" FT CDS complement(2252..2485) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2UZP8" FT /protein_id="CAF02046.1" FT /translation="MGCLISMFSSNSKASSNVPTRDSSISFPHPDQHISIRTFRALNHR FT PMSKLTLKRKGNFLTLDFSKSMPEVQEGRASI" XX SQ Sequence 2799 BP; 731 A; 552 C; 734 G; 782 T; 0 other; accggatggc cgcgcccgaa aaagcaggtg gcccccacaa tgaccgcgcc cgtgaaagaa 60 agtggtccct gcgcacttgt tttggtcggc cagtcatatt cacgcgtgaa agtctagata 120 tttgttgttt gtctttatag acttcgtcgc gaagtagtag agcgcgtcaa catgtgggat 180 ccattggtga acgattttcc cgaaaccgtt cacggtttcc gttctatgct tgcagttaaa 240 tatctgttac atctggaaca ggaatacgat cgcggtactg tcggggctga gtatatacgg 300 gatctaatag gggttctacg gtgtaagaat tatgtcgaag cgaccaggag atataataat 360 ctcaacaccc gtatccaagg tgcggaggag gctgaacttc gacagcccat acacgaaccg 420 tgttgttgcc cccactgtcc gcgtcaccag aagcaaaata tgggccaaca ggcccatgta 480 tcggaaaccc aagatgtaca gaatgtatcg aagcccagat gtccctaagg gctgtgaagg 540 cccatgtaag gtccagtcgt ttgagcagag ggatgatgtg aagcaccttg gtatctgtaa 600 ggtgattagt gatgtgacgc gtgggcctgg gctgacacac agggtcggaa agaggttttg 660 tatcaagtcc atttacattc ttggtaagat ctggatggat gaaaatatta agaagcagaa 720 tcacactaat aatgtgatgt tttacctgct tagggataga aggccgtatg gcaatgcgcc 780 ccaagacttt gggcagatat ttaacatgtt tgataatgag cccagtactg caacaattaa 840 gaacgatttg agggataggt ttcaggtgtt gaggaaattt catgccactg ttgttggtgg 900 tccatctggc atgaaggagc aggcgttggt gaaaaggttt tacaagctga atcatcacgt 960 gacatataat caccaggagg cagggaagta tgagaatcac acagagaatg cgttgttatt 1020 gtatatggca tgtacacatg cctcgaatcc tgtgtatgct acgctgaaaa tacgcatcta 1080 tttctatgat gcagtgacaa attaataaag gttgaatttt attgcatgtt gctccgtaac 1140 ttgtagtgtg tgtagtaata catcgtacac aacatgatca acagcttgaa ggacagtgtt 1200 aatggaaata acgcctatca tatctaaata catgagcact tgatatctaa atactcttaa 1260 gaaacgacca gtctgaggcc gtaaggtcgt ccagaccttg aagttgagaa aacacttgtg 1320 aatccccaat gccttccgaa ggttgtggtt gaaccgtatc tggagtgtga tgatgtcgtg 1380 gttcatgttc cctggcctct tgtcgtggtc ggtggtttcg aaatagaggg gatttgttat 1440 gtcccaggta aaaacgccat tccttgcttg aggcgcagtg atgagttccc ctgtgcgaga 1500 atccatggtt gatgcagtcg atatggagat agaacgagca gccgcattcg aggtctaccc 1560 gcctacgtct gacggccctg gtcttcgctg tgcggtgttg gactttgatg ggcactagag 1620 agcaatggct cgtggagggt gatgaaggtg gcattcttta aagcccaggc tttaagggat 1680 tggttctttt cctcgtccag aaactcttta tatgatgatg ttggacctgg attgcagagg 1740 aagatagtgg gaatgccgcc tttaatttga attggcttcc cgtattttgt attgctttgc 1800 cagtctcttt gggcccccat gaattctttg aagtgtttga ggtagtgggg gtcgacgtca 1860 tcaatgacgt tgtaccaggc gtcgtttgaa tataccttgg gagacagatc caggtgtcca 1920 caaagataat tatggggtcc cagtgaacga gcccacattg ttttgccggt tcggctatca 1980 ccttctataa caatactgat cggtctccat ggccgcgcag cgggactgca tatattttcg 2040 gatacccata cctctatgtc ttctgggact tgtgtaaaag atgatgataa gaacggacta 2100 acgtaagttt gtggcggagc ctggaagatt ctatctgcgt tagcagatat gttatggaac 2160 tgtaaaaaaa aggactttgg atctttttct ttaataattt gaagagcctc ggatttagac 2220 gaagcattca acgcgtctgc atatacctga gctaaatgct ggccctcccc tcttgcactt 2280 ctggcatcga cttggaaaag tccagcgtca agaaattccc cttccttttc aatgtaagct 2340 ttgacatcgg acgatgattt agcgccctga atgttcggat ggaaatgtgt tgatcgggat 2400 ggggaaatga gatcgaagaa tctcgggttg gtacattgga acttgccttc gaattggatg 2460 agaacatgga gatgaggcac cccatcctga tgtagttctc tgcaaaccct aatgaatttg 2520 atatccgtcg ggtacgaaag ggcttgtaat tgggaaaggg cctcttcttt tgttaatgag 2580 catcggggat aggtgatgaa ataatttttg gcatttattt gaaaacgacc ggctcttggc 2640 atattggctg tcgttttgga tcgggggaca ctcaaaactc caggggaacg gtggaatggg 2700 gggcaatata tatgatgtcc cccaatggca tatgtgtaaa taggtagact tccattcaaa 2760 atttgaattc cgaatattgg cggtcatccg attaatatt 2799 //