ID   AJ585520; SV 1; linear; genomic RNA; STD; VRL; 2208 BP.
XX
AC   AJ585520;
XX
DT   13-OCT-2004 (Rel. 81, Created)
DT   13-OCT-2004 (Rel. 81, Last updated, Version 1)
XX
DE   Cucumber mosaic virus 3a gene for movement protein and cp gene for coat
DE   protein, genomic RNA, strain 242
XX
KW   3a gene; coat protein; cp gene; movement protein.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2208
RA   Mitter N.;
RT   ;
RL   Submitted (13-OCT-2003) to the INSDC.
RL   Mitter N., AFFS Biotechnology, Qld Department of Primary Industries, QABC,
RL   Qld Bioscience Precinct, 306 Carmody Rd, St Lucia, Brisbane, Queensland,
RL   4072, AUSTRALIA.
XX
RN   [2]
RA   Sulistyowati E., Mitter N., Bastiaan-Net S., Roossinck M.J., Dietzgen R.G.;
RT   "Biological characterisation and RNA 3 sequence analysis of six Australian
RT   strains of Cucumber mosaic virus";
RL   Unpublished.
XX
DR   MD5; 47fee5f53091e78bb20e0c2198e01276.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2208
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /strain="242"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /isolation_source="silver beet"
FT                   /db_xref="taxon:12305"
FT   CDS             112..951
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q5ZPK4"
FT                   /protein_id="CAE51923.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIVSFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKQCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1249..1905
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q5ZPK3"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q5ZPK3"
FT                   /protein_id="CAE51924.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDTLETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2208 BP; 515 A; 515 C; 527 G; 651 T; 0 other;
     gtaatcttac cactgtgtgt gtgtgtgtgt gtgtatcgag tcgtgtttga gtcgtgttgt        60
     ccgcacatat atattttatt tctttgtaca gtgtgttaga tttcccgagg catggctttc       120
     caaggtacca gtaggacttt aactcaacag tcctcagcgg ctacgtctga cgatcttcaa       180
     aagatattat ttagccctga agccattaag aaaatggcta ctgagtgtga cctaggccgg       240
     catcattgga tgcgcgctga taatgctatt tcagtccggc ccctcgttcc cgaagtaacc       300
     cacggtcgta ttgtttcctt ctttaagtct ggatatgatg ttggtgaatt gtgctcaaaa       360
     ggatacatga gcgtccctca agtgttatgt gctgttactc gaacggtttc cactgatgct       420
     gaagggtctt tgagaattta cctagctgat ctgggcgaca aggagctatc tcccatagat       480
     gggcaatgcg tttcgttaca taaccatgat cttcccgctt tggtgtcttt ccaaccgacg       540
     tatgattgtc ctatggaaac agttgggaat cgtaagcagt gttttgctgt cgttattgaa       600
     agacatggtt atattgggta taccggcacc acagctagcg tgtgtagtaa ttggcaagca       660
     aggttttcat ctaagaataa caactacact catatcgcag ctgggaagac tctagtactg       720
     cctttcaaca gattagctga gcaaacaaag ccgtcagctg tcgctcgcct gttgaagtcg       780
     caattgaaca acattgaatc ttcgcaatat ctgttaacga acgcgaagat taatcaaaat       840
     gcgcgcagtg agtccgagga attaaatgtt gagagccctc ccgccgcaat cgggagttct       900
     tccgcgtccc gctccgaagc cttcagaccg caggtggtta acggtcttta gcactttggt       960
     gcgtattagt atataaatat ttgtgagtct gttcataata ttatatctat agtgtcctgt      1020
     gtgagttgct acagtagaca tctgtgacgc gatgccgtgt tgagaaggga acacatctgg      1080
     ttttagtaag cctacatcat agttttgagg ttcaattcct cttactccct gttgagcccc      1140
     ttgctttctc atggatgctt ctccgcgaga ttgcgttatt gtctactgac tatatagaga      1200
     gtgtgtgtgc cgtgttttct cttttgtgtc gtagaattga gtcgagtcat ggacaaatct      1260
     gaatcaacca gtgctggtcg taaccgtcga cgtcgtccgc gtcgtggttc ccgctccgcc      1320
     tcctcctccg cggatgctaa ctttagagtc ttgtcgcagc agctttcgcg acttaacaag      1380
     acgttagcag ctggtcgtcc aactattaac cacccaacct ttgtagggag tgaacgctgt      1440
     aaacctgggt acacgttcac atctattacc ctgaagccac caaaaataga ccgcgggtct      1500
     tattacggta aaaggttgtt attacctgat tcagtcacgg aatatgataa gaagcttgtt      1560
     tcgcgcattc aaattcgagt taatcctttg ccgaaatttg attctaccgt gtgggtgaca      1620
     gttcgtaaag ttcctgcctc ctcggactta tctgttgccg ccatctctgc tatgttcgcg      1680
     gacggagcct caccggtact ggtttatcag tatgctgcat ctggagtcca agctaacaac      1740
     aaattgttgt atgatctttc ggcgatgcgc gctgatatag gtgacatgag aaagtacgcc      1800
     gtcctcgtgt attcaaaaga cgatacgctc gagacggatg agctagtact tcatgttgac      1860
     atcgagcacc aacgcattcc cacgtctggg gtgctcccag tctgattccg tgttcccaga      1920
     accctccctc cgatttctgt ggcgggagct gagttggcag ttctgctata aactgtctga      1980
     agtcactaaa cgtttattac ggtgaacggg ttgtccatcc agcttacggc taaaatggtc      2040
     agtcgtggag aaatccacgc cagcagattt acaaatctct gaggcgcctt tgaaaccatc      2100
     tcctaggttt cttcggaagg acttcggtcc gtgtacctct agtacaacgt gctagtttca      2160
     gggtacgggt gcccccccac tttcgtgggg gcctccaaaa ggagacca                   2208
//