ID   AJ585519; SV 1; linear; genomic RNA; STD; VRL; 2211 BP.
XX
AC   AJ585519;
XX
DT   13-OCT-2004 (Rel. 81, Created)
DT   13-OCT-2004 (Rel. 81, Last updated, Version 1)
XX
DE   Cucumber mosaic virus 3a gene for movement protein and cp gene for coat
DE   protein, genomic RNA, strain 241
XX
KW   3a gene; coat protein; cp gene; movement protein.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2211
RA   Mitter N.;
RT   ;
RL   Submitted (13-OCT-2003) to the INSDC.
RL   Mitter N., AFFS Biotechnology, Qld Department of Primary Industries, QABC,
RL   Qld Bioscience Precinct, 306 Carmody Rd, St Lucia, Brisbane, Queensland,
RL   4072, AUSTRALIA.
XX
RN   [2]
RA   Sulistyowati E., Mitter N., Bastiaan-Net S., Roossinck M.J., Dietzgen R.G.;
RT   "Biological characterisation and RNA 3 sequence analysis of six Australian
RT   strains of Cucumber mosaic virus";
RL   Unpublished.
XX
DR   MD5; cd4bc33dc7a0004d6397a773dd9fca0b.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2211
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /strain="241"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia"
FT                   /isolation_source="Capsicum"
FT                   /db_xref="taxon:12305"
FT   CDS             95..934
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q8AZL4"
FT                   /protein_id="CAE51921.1"
FT                   /translation="MAFQGTSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLKIYLADLGDKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE
FT                   RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK
FT                   SQLNNVSSSRYLLPNVALNQNASGHESEILNESPPIAIGSPSASRNNSFRSQVVNGL"
FT   CDS             1234..1890
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q76CB0"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q76CB0"
FT                   /protein_id="CAE51922.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLRLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 2211 BP; 500 A; 518 C; 530 G; 663 T; 0 other;
     gtaatcttac cactttcttt cacgtcgtgt cgcgtcagtc cacgctgtgt gtgtgtgtgt        60
     gttagttagg gtgtgtgttt agattgcgaa ggtcatggct ttccaaggta ccagtaggac       120
     gttaactcaa cagtcctcgg cggcgtcgtc tgacgactta cagaagatat tattcagccc       180
     cgatgccatc aagaagatgg ctactgagtg tgacctaggt cgacatcatt ggatgcgcgc       240
     ggataacgcc atctctgtca gacctctcgt tccccaagta accagtaaca atttattgtc       300
     tttctttaaa tctgggtatg atgccggtga attgcgctct aaaggctata tgagcgttcc       360
     tcaagtactg tgtgccgtta ccaggacggt ttctacggat gctgagggtt ccttgaaaat       420
     ttacttggct gacctaggtg ataaagaatt atccccaatt gatgggcagt gtgttacttt       480
     acataatcat gagctccctg ctttgatatc tttccaacct acctacgatt gccccatgga       540
     attagttggc aatcggcatc gatgttttgc ggtagtcgtt gagagacatg gttatattgg       600
     ttacggtggt accactgcta gcgtgtgtag taactggcaa gctcagtttt cttcaaagaa       660
     taataattac acacacgccg ctgctggtaa gactcttgtg ttgccttaca acagattagc       720
     tgagcattcg aaaccgtcag ccgtcgctcg cctgttgaag tcgcagttaa acaacgttag       780
     ctcatcgcgt tatcttttac cgaacgttgc tcttaaccaa aatgcgtctg ggcacgagtc       840
     cgagatttta aacgaaagcc ctcccatcgc tatagggagt ccgtccgcgt cccgtaacaa       900
     tagcttcaga tcgcaggtgg ttaacggtct ttagtgtttt gttacgttgt acctatgtat       960
     atatatacta cgtttatctt ccgtatgtaa atacatgtga gtctagagtc ccgtgtgagt      1020
     tgtaacggta gacatctgtg acgcgaagcc gcttgaagat ttcccatctg gggttagtaa      1080
     gtccacatca cagttttaag gttcaattcc ttttgctccc tgttgggccc cttactttct      1140
     catggatgct tctccgcgag ttagcgttta gttgttcacc tgagtcgtgt gttttagcgt      1200
     cttagtgtcg tgttttcgcg tcttagtgtg cctatggaca aatctggatc tcccaatgct      1260
     agtagaacct cccggcgtcg tcgcccgcgt agaggttctc ggtccgcttc tggtgcggat      1320
     gcagggttgc gtgctttgac tcagcagatg ctgagactca ataaaaccct cgccattggt      1380
     cgtcccactc ttaaccaccc aaccttcgtg ggtagtgaaa gctgtaaacc cggttacact      1440
     ttcacatcta ttaccctgaa accgcctgaa attgagaaag gttcatattt tggtagaagg      1500
     ttgtctttgc cagattcagt cacggactat gataagaagc ttgtttcgcg cattcaaatt      1560
     aggattaatc ctttgccgaa atttgattct accgtgtggg ttacagttcg gaaagtacct      1620
     tcatcatccg atctttccgt cgccgccatc tctgctatgt ttggcgatgg taattcaccg      1680
     gttttggttt atcagtatgc tgcgtccgga gttcaggcca acaataagtt actttatgac      1740
     ctgtccgaga tgcgtgctga tatcggcgac atgcgtaagt acgccgtcct ggtttactcg      1800
     aaagacgaca aactagagaa ggacgagatt gtacttcatg tcgacgtcga gcatcaacga      1860
     attcctatct cacggatgct cccgacttag tccgtgtgtt taccggcgtc cgaagacgtt      1920
     aaactacact ctcaatcgcg agtgatgagt tggtagtatt gctccaaact gcctgaagtc      1980
     cctaaacgtg ttgttgcgcg gggaacgggt tgtccatcca gcttacggct aaaatggtca      2040
     gtcgtgtctt tcacacgccg atgtcttaca agatgtcgag gtacccttga aatcatctcc      2100
     tggatttctt cggaagggct tcgtgagaag ctcgtgcacg gtaatacact gatattacca      2160
     agagtgcggg tatcgcctgt ggttttccac aggttctcca taaggagacc a               2211
//