ID   AJ581997; SV 3; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   AJ581997;
XX
DT   04-SEP-2003 (Rel. 77, Created)
DT   19-MAY-2006 (Rel. 87, Last updated, Version 4)
XX
DE   Cymbidium mosaic virus cp gene for coat protein, isolate skt1
XX
KW   coat protein; cp gene.
XX
OS   Cymbidium mosaic virus
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
XX
RN   [1]
RC   revised by [3]
RA   Sherpa A.R.;
RT   ;
RL   Submitted (03-SEP-2003) to the INSDC.
RL   Sherpa A.R., Plant virus lab, Inst of Himalayan Bioresource Technology,
RL   Palampur, Himachal Pradesh, 176061, INDIA.
XX
RN   [3]
RC   revised by [4]
RA   Sherpa A.R.;
RT   ;
RL   Submitted (08-SEP-2003) to the INSDC.
RL   Sherpa A.R., Plant virus lab, Inst of Himalayan Bioresource Technology,
RL   Palampur, Himachal Pradesh, 176061, INDIA.
XX
RN   [4]
RP   1-672
RA   Sherpa A.R.;
RT   ;
RL   Submitted (10-OCT-2003) to the INSDC.
RL   Sherpa A.R., Plant virus lab, Inst of Himalayan Bioresource Technology,
RL   Palampur, Himachal Pradesh, 176061, INDIA.
XX
RN   [5]
RX   DOI; 10.1111/j.1439-0434.2006.01093.x.
RX   AGRICOLA; IND43796507.
RA   Sherpa A.R., Hallan V., Pathak P., Zaidi A.A.;
RT   "Characterization of the Coat Protein Gene of Cymbidium mosaic virus
RT   Isolates from India";
RL   J. Phytopathol. 154(5):275-280(2006).
XX
DR   MD5; 6291c048b9b86bc92de9ee87af3f9f84.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Cymbidium mosaic virus"
FT                   /host="Cattleya"
FT                   /isolate="skt1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Sikkim"
FT                   /db_xref="taxon:12178"
FT   CDS             1..672
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q70GG8"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:Q70GG8"
FT                   /protein_id="CAE46528.2"
FT                   /translation="MGEPTPTPAATYSAADPTSAPKLDDLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQAIQNGNLITNIAEVTKGHLGSTNTLYALPGPPT
FT                   E"
XX
SQ   Sequence 672 BP; 132 A; 240 C; 161 G; 139 T; 0 other;
     atgggagagc ccactccaac cccagctgcc acttactccg ctgccgaccc cacttctgca        60
     cccaagttgg acgacctggc tgccattaag tactcacctg tcacctcctc catcgccacc       120
     cccgaagaaa tcaaggccat aacccaattg tgggttaaca accttggcct ccccgctgac       180
     accgtaggta ccgcggccat tgacctggcc cgcgcctacg ctgacgtcgg ggcgtccaag       240
     agtgctaccc tgcttggttt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc       300
     gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttatta cgcaaaagtg       360
     gtgtggaatc tgatgctggc cactaacgat ccgcccgcca actgggccaa ggctggtttc       420
     caggaggata cccggtttgc cgcctttgac ttcttcgatg ccgttgattc cactgccgcg       480
     ctggagcctg ctgaatggca gcgccgccct actgaccgtg aacgtgctgc gcactcgatc       540
     gggaagtacg gcgcccttgc ccgtcaggcg atccaaaacg ggaacctcat cacaaacatt       600
     gccgaagtca ccaagggcca tcttggctcc accaacactc tctatgctct gcctggaccc       660
     cctactgaat aa                                                           672
//